RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO21	YDL140C	RPL17B	P46990	184 aa	Known RBP	3.64	□□□□□ -1.83
RPO21	YDL140C	TAF6	P53040	516 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	TRM112	P53738	135 aa	Predicted RBP	3.64	□□□□□ -1.83
RPO21	YDL140C	TEP1	P53916	434 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	YML119W	Q03208	357 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	RAD30	Q04049	632 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	ATG26	Q06321	1198 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	RCL1	Q08096	367 aa	Predicted RBP	3.64	□□□□□ -1.83
RPO21	YDL140C	VPS54	Q12071	889 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	YPL066W	Q12194	479 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	HER1	Q12276	1246 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	SKS1	Q12505	502 aa		3.64	□□□□□ -1.83
RPO21	YDL140C	KAR1	P11927	433 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	SRV2	P17555	526 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	VPS1	P21576	704 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	BAS1	P22035	811 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	YKL107W	P34251	309 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	PSA1	P41940	361 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	RTT103	Q05543	409 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	RTN2	Q12443	393 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	URA3	P03962	267 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	LEU1	P07264	779 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	YMR085W	P0CF18	432 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	RPL40A	P0CH08	128 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	RPL40B	P0CH09	128 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	RPL30	P14120	105 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	RPC34	P32910	317 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	YOR062C	P36025	268 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	JEN1	P36035	616 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	TRR2	P38816	342 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	TMA108	P40462	946 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	CAF16	P43569	289 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	SHY1	P53266	389 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	LPP1	Q04396	274 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	HRD1	Q08109	551 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	GAL4	P04386	881 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	ZUO1	P32527	433 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	SEC17	P32602	292 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	MIX23	P38162	196 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	MTC4	P38335	694 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	YHR035W	P38769	630 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	UBA4	P38820	440 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	MET30	P39014	640 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	BDH2	P39713	417 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	EXG2	P52911	562 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	YGL260W	P53056	76 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	GPN3	Q06543	272 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	PDA1	P16387	420 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	KGD1	P20967	1014 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	VPH2	P32341	215 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	RPN2	P32565	945 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	YEF1	P32622	495 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	GPX1	P36014	167 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	YPT35	P38815	214 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	YML131W	Q03102	365 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	GLO2	Q05584	274 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	RBS1	Q05672	457 aa	Known RBP	3.63	□□□□□ -1.83
RPO21	YDL140C	CRR1	Q05790	422 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	SLD7	Q08457	257 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	YGR035W-A	Q45U48	73 aa		3.63	□□□□□ -1.83
RPO21	YDL140C	TAH1	P25638	111 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	HIR1	P32479	840 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	PRP21	P32524	280 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	CDC13	P32797	924 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	ANR2	P36090	516 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	GPI16	P38875	610 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	FAR7	P43592	221 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	GET1	P53192	235 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	VOA1	P53262	265 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	YNR048W	P53740	393 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	MOT3	P54785	490 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	PEX12	Q04370	399 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	RIF2	Q06208	395 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	NBA1	Q08229	501 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	AVL9	Q12500	764 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	RPL6B	P05739	176 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	SEC53	P07283	254 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	TRP4	P07285	380 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	ADH4	P10127	382 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	REV1	P12689	985 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	DMC1	P25453	334 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	EDS1	P38073	919 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	ATG14	P38270	344 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	TDA11	P38854	504 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	UME6	P39001	836 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	APQ12	P40532	138 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	ULP2	P40537	1034 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	UBC13	P52490	153 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	MRM2	P53123	320 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	EFR3	Q03653	782 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	ECM22	Q05958	814 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	NUS1	Q12063	375 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	HSH49	Q99181	213 aa	Predicted RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	TPK2	P06245	380 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	TY1A-H	P0C2I4	478 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	ART10	P18634	518 aa	Known RBP	3.62	□□□□□ -1.83
RPO21	YDL140C	ATP12	P22135	325 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.62	□□□□□ -1.83	not detected
RPO21	YDL140C	DCW1	P36091	449 aa		3.62	□□□□□ -1.83
RPO21	YDL140C	NCL1	P38205	684 aa	Known RBP	3.62	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms