RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	MSK1	P32048	576 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	YPS1	P32329	569 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SMP1	YBR182C	RTC2	P38279	296 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	DED81	P38707	554 aa	Known RBP	4.67	□□□□□ -1.66
SMP1	YBR182C	VRG4	P40107	337 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	MRK1	P50873	501 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	PKP2	P53170	491 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	NUP53	Q03790	475 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	YMR087W	Q04299	284 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	GLO2	Q05584	274 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	ECM7	Q06200	448 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	TPO3	Q06451	622 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	BSP1	Q06604	576 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	SYO1	Q07395	620 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	TY3A-G	Q12173	290 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	ATG34	Q12292	412 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	YDR262W	Q12331	272 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	RNH203	Q12338	110 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	MED4	Q12343	284 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	TY3A-I	Q99219	290 aa		4.67	□□□□□ -1.66
SMP1	YBR182C	YCL068C	P25593	260 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	RPT5	P33297	434 aa	Known RBP	4.66	□□□□□ -1.66
SMP1	YBR182C	CAB3	P36076	571 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	FLO10	P36170	1169 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	STP2	P38704	541 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	YAL037W	P39728	267 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	YEL020C	P39994	560 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	FAU1	P40099	211 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	GCN20	P43535	752 aa	Known RBP	4.66	□□□□□ -1.66
SMP1	YBR182C	YGL185C	P53100	379 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	GND2	P53319	492 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	MPS1	P54199	764 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	MMT1	Q03218	510 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	CTL1	Q03220	320 aa	Known RBP	4.66	□□□□□ -1.66
SMP1	YBR182C	URH1	Q04179	340 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	IVY1	Q04934	453 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	RBD2	Q12270	262 aa		4.66	□□□□□ -1.66
SMP1	YBR182C	RPL24A	P04449	155 aa	Known RBP	4.65	□□□□□ -1.66
SMP1	YBR182C	RPL12A	P0CX53	165 aa	Known RBP	4.65	□□□□□ -1.66
SMP1	YBR182C	RPL12B	P0CX54	165 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	RSR1	P13856	272 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	CUE2	P36075	443 aa	Known RBP	4.65	□□□□□ -1.66
SMP1	YBR182C	IRC7	P43623	340 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	YGL242C	P53066	181 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	RET3	P53600	189 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	LGE1	Q02796	332 aa	Known RBP	4.65	□□□□□ -1.66
SMP1	YBR182C	RRN11	Q04712	507 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	YLR173W	Q06247	608 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	YOL075C	Q08234	1294 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	SPO24	Q3E752	67 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	EDE1	P34216	1381 aa		4.65	□□□□□ -1.66
SMP1	YBR182C	RPL18A	P0CX49	186 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	RPL18B	P0CX50	186 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	ARF1	P11076	181 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	MSS116	P15424	664 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	YCR007C	P25354	239 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	CTR86	P25355	563 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	MGR1	P25573	417 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	BUB3	P26449	341 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	ICL1	P28240	557 aa	Predicted RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	ACH1	P32316	526 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	RAD23	P32628	398 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	FRE1	P32791	686 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	BUD2	P33314	1104 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	SKN1	P33336	771 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	RPC25	P35718	212 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	YKT6	P36015	200 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	DOA1	P36037	715 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	YMR262W	P38430	313 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	TCD1	P38756	429 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	HMS2	P47175	358 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	PCP1	P53259	346 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	MRP51	Q02950	344 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	BOP2	Q06150	570 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	BCP1	Q06338	283 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	YLL007C	Q07799	665 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	PKH2	Q12236	1081 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	YOL107W	Q12239	342 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	PAA1	Q12447	191 aa	Known RBP	4.65	□□□□□ -1.67
SMP1	YBR182C	RGS2	Q99188	309 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	FSH3	Q99369	266 aa		4.65	□□□□□ -1.67
SMP1	YBR182C	YPT1	P01123	206 aa	Known RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	OPI3	P05375	206 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	CAR2	P07991	424 aa	Known RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	MER1	P16523	270 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	RPB4	P20433	221 aa	Predicted RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	YUR1	P26725	428 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	EFB1	P32471	206 aa	Known RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	RIM2	P38127	377 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	MMF1	P40185	145 aa	Known RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	CDC40	P40968	455 aa	Predicted RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	TOS3	P43637	560 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	YNL260C	P53846	198 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	GPI15	P53961	229 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	NUP100	Q02629	959 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	FMP30	Q02883	468 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	SLD5	Q03406	294 aa		4.64	□□□□□ -1.67
SMP1	YBR182C	SNT309	Q06091	175 aa	Predicted RBP	4.64	□□□□□ -1.67
SMP1	YBR182C	DIC1	Q06143	298 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms