RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	AIF1	P52923	378 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	RCF2	P53721	224 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	YMR155W	Q03795	547 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	RIF2	Q06208	395 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	SEC10	Q06245	871 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	VHS3	Q08438	674 aa		4.8	□□□□□ -1.64
PRE7	YBL041W	COX1	P00401	534 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	CDC26	P14724	124 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	SEC62	P21825	274 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	ERG1	P32476	496 aa	Known RBP	4.79	□□□□□ -1.64
PRE7	YBL041W	NIP1	P32497	812 aa	Known RBP	4.79	□□□□□ -1.64
PRE7	YBL041W	CDC5	P32562	705 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	COX13	P32799	129 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	RPS1A	P33442	255 aa	Known RBP	4.79	□□□□□ -1.64
PRE7	YBL041W	CTP1	P38152	299 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	YBR071W	P38243	211 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	PHO89	P38361	574 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	MGS1	P40151	587 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	COA1	P40452	197 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	CAB2	P40506	365 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	MAD2	P40958	196 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	IKS1	P47042	667 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	TEL2	P53038	688 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	ERG13	P54839	491 aa	Known RBP	4.79	□□□□□ -1.64
PRE7	YBL041W	USA1	Q03714	838 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	GAD1	Q04792	585 aa		4.79	□□□□□ -1.64
PRE7	YBL041W	ARG4	P04076	463 aa	Predicted RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	KAR1	P11927	433 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	NMT1	P14743	455 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	TRX3	P25372	127 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	TAH1	P25638	111 aa	Predicted RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	SSH4	P32343	579 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	HIS7	P33734	552 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	HES1	P35843	434 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	CAB3	P36076	571 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	ASC1	P38011	319 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	RIM2	P38127	377 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	BMT2	P38278	337 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	OAF1	P39720	1047 aa	Predicted RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	FMP52	P40008	231 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	SNM1	P40993	198 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	SEC27	P41811	889 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	GCD10	P41814	478 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	LIA1	P47120	325 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	JHD2	P47156	728 aa	Predicted RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	SDT1	P53078	280 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	IMO32	P53219	342 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	LSM3	P57743	89 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	PRP38	Q00723	242 aa	Predicted RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	RNY1	Q02933	434 aa	Known RBP	4.78	□□□□□ -1.64
PRE7	YBL041W	YML131W	Q03102	365 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	BOP2	Q06150	570 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	MMT2	Q08970	484 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	MHT1	Q12525	324 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	YCL012C	Q8J0M4	134 aa		4.78	□□□□□ -1.64
PRE7	YBL041W	IPP1	P00817	287 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	YPT1	P01123	206 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	RHO2	P06781	192 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	CHA1	P25379	360 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	MGR1	P25573	417 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	YJU2	P28320	278 aa	Predicted RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	YMC1	P32331	307 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	NGG1	P32494	702 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	PET127	P32606	800 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	SUI1	P32911	108 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	PTH2	P34222	208 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	SEF1	P34228	1148 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	BET3	P36149	193 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	APT2	P36973	181 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	UTP9	P38882	575 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	PRP39	P39682	629 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	YIL152W	P40455	235 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	PRM2	P40534	656 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	ARC1	P46672	376 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	ROG1	P53118	685 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	NNF2	P53253	936 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	SLM2	P53955	656 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	YDR338C	Q05497	695 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	MDM30	Q05930	598 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	STE23	Q06010	1027 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	RRP40	Q08285	240 aa	Known RBP	4.77	□□□□□ -1.65
PRE7	YBL041W	YOL159C	Q08300	171 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	APC9	Q12107	265 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	TMS1	Q12116	473 aa		4.77	□□□□□ -1.65
PRE7	YBL041W	TY2A-LR1	P0C2J4	438 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	TY2A-F	P0CX61	438 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	TY2A-GR2	P0CX62	438 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	HSC82	P15108	705 aa	Known RBP	4.76	□□□□□ -1.65
PRE7	YBL041W	MDM10	P18409	493 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	SGV1	P23293	657 aa	Known RBP	4.76	□□□□□ -1.65
PRE7	YBL041W	TY2A-C	P25383	438 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	BUD14	P27637	709 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	FAA1	P30624	700 aa	Known RBP	4.76	□□□□□ -1.65
PRE7	YBL041W	PMT2	P31382	759 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	ORC2	P32833	620 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	RPS27A	P35997	82 aa	Known RBP	4.76	□□□□□ -1.65
PRE7	YBL041W	CBP4	P37267	147 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	RPS27B	P38711	82 aa		4.76	□□□□□ -1.65
PRE7	YBL041W	LIN1	P38852	340 aa	Predicted RBP	4.76	□□□□□ -1.65
PRE7	YBL041W	FRT2	P39734	528 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms