RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C YPL071CQ02864 156 aa6.37□□□□□ -1.39
LDB7YBL006C YPR091CQ06833 770 aa6.37□□□□□ -1.39
LDB7YBL006C YEH2Q07950 538 aa6.37□□□□□ -1.39
LDB7YBL006C YOR365CQ08844 703 aa6.37□□□□□ -1.39
LDB7YBL006C JLP1Q12358 412 aa6.37□□□□□ -1.39
LDB7YBL006C PRP46Q12417 451 aaPredicted RBP6.37□□□□□ -1.39
LDB7YBL006C YKL033W-AQ86ZR7 236 aa6.37□□□□□ -1.39
LDB7YBL006C YOR032W-AQ8TGS1 66 aa6.37□□□□□ -1.39
LDB7YBL006C RPL20AP0CX23 172 aaKnown RBP6.36□□□□□ -1.39
LDB7YBL006C RPL20BP0CX24 172 aaPredicted RBP6.36□□□□□ -1.39
LDB7YBL006C EMP70P32802 667 aa6.36□□□□□ -1.39
LDB7YBL006C PTC1P35182 281 aa6.36□□□□□ -1.39
LDB7YBL006C DHR2P36009 735 aaPredicted RBP6.36□□□□□ -1.39
LDB7YBL006C BET3P36149 193 aa6.36□□□□□ -1.39
LDB7YBL006C YBL029WP38201 376 aa6.36□□□□□ -1.39
LDB7YBL006C STP2P38704 541 aa6.36□□□□□ -1.39
LDB7YBL006C YEL020CP39994 560 aa6.36□□□□□ -1.39
LDB7YBL006C PMT4P46971 762 aa6.36□□□□□ -1.39
LDB7YBL006C TPC1P53257 314 aa6.36□□□□□ -1.39
LDB7YBL006C PBP1P53297 722 aaKnown RBP6.36□□□□□ -1.39
LDB7YBL006C BSC5P53755 489 aa6.36□□□□□ -1.39
LDB7YBL006C CUS2P53830 285 aaPredicted RBP6.36□□□□□ -1.39
LDB7YBL006C SKI8Q02793 397 aaPredicted RBP6.36□□□□□ -1.39
LDB7YBL006C SMA2Q04658 369 aa6.36□□□□□ -1.39
LDB7YBL006C UAF30Q08747 228 aa6.36□□□□□ -1.39
LDB7YBL006C MLH3Q12083 715 aa6.36□□□□□ -1.39
LDB7YBL006C RPN5Q12250 445 aaKnown RBP6.36□□□□□ -1.39
LDB7YBL006C CDC39P25655 2108 aaKnown RBP6.35□□□□□ -1.39
LDB7YBL006C RAS2P01120 322 aaKnown RBP6.35□□□□□ -1.39
LDB7YBL006C RPB5P20434 215 aa6.35□□□□□ -1.39
LDB7YBL006C AIM2P39721 246 aa6.35□□□□□ -1.39
LDB7YBL006C AYR1P40471 297 aa6.35□□□□□ -1.39
LDB7YBL006C PKP1P40530 394 aa6.35□□□□□ -1.39
LDB7YBL006C SEC26P41810 973 aaKnown RBP6.35□□□□□ -1.39
LDB7YBL006C ECO1P43605 281 aa6.35□□□□□ -1.39
LDB7YBL006C HSV2P50079 448 aaPredicted RBP6.35□□□□□ -1.39
LDB7YBL006C HOS2P53096 452 aaPredicted RBP6.35□□□□□ -1.39
LDB7YBL006C MPA43P53583 542 aaPredicted RBP6.35□□□□□ -1.39
LDB7YBL006C YPR172WQ06608 200 aa6.35□□□□□ -1.39
LDB7YBL006C YLR413WQ06689 675 aa6.35□□□□□ -1.39
LDB7YBL006C YRM1Q12340 786 aa6.35□□□□□ -1.39
LDB7YBL006C YKL018C-AQ3E7A7 99 aa6.35□□□□□ -1.39
LDB7YBL006C MRP13P12686 339 aa6.34□□□□□ -1.39
LDB7YBL006C AAC3P18238 307 aa6.34□□□□□ -1.39
LDB7YBL006C MCK1P21965 375 aaKnown RBP6.34□□□□□ -1.39
LDB7YBL006C CTS1P29029 562 aa6.34□□□□□ -1.39
LDB7YBL006C MKK1P32490 508 aa6.34□□□□□ -1.39
LDB7YBL006C FRE2P36033 711 aa6.34□□□□□ -1.39
LDB7YBL006C VPS51P36116 164 aa6.34□□□□□ -1.39
LDB7YBL006C GLG1P36143 616 aa6.34□□□□□ -1.39
LDB7YBL006C EDS1P38073 919 aa6.34□□□□□ -1.39
LDB7YBL006C DSS1P39112 969 aa6.34□□□□□ -1.39
LDB7YBL006C CIN1P40987 1014 aa6.34□□□□□ -1.39
LDB7YBL006C IRC6P43615 237 aa6.34□□□□□ -1.39
LDB7YBL006C APS3P47064 194 aa6.34□□□□□ -1.39
LDB7YBL006C EMC2P47133 292 aaKnown RBP6.34□□□□□ -1.39
LDB7YBL006C ARI1P53111 347 aaKnown RBP6.34□□□□□ -1.39
LDB7YBL006C RPN14P53196 417 aa6.34□□□□□ -1.39
LDB7YBL006C GOR1P53839 350 aa6.34□□□□□ -1.39
LDB7YBL006C REX2P54964 269 aaKnown RBP6.34□□□□□ -1.39
LDB7YBL006C YMR310CQ04867 317 aaPredicted RBP6.34□□□□□ -1.39
LDB7YBL006C SEI1Q06058 285 aa6.34□□□□□ -1.39
LDB7YBL006C GMC2Q06201 188 aa6.34□□□□□ -1.39
LDB7YBL006C SAS5Q99314 248 aa6.34□□□□□ -1.39
LDB7YBL006C SEC16P48415 2195 aaKnown RBP6.34□□□□□ -1.4
LDB7YBL006C ATP4P05626 244 aa6.33□□□□□ -1.4
LDB7YBL006C RPB10P22139 70 aa6.33□□□□□ -1.4
LDB7YBL006C YBR062CP38239 180 aa6.33□□□□□ -1.4
LDB7YBL006C ARN1P38731 627 aa6.33□□□□□ -1.4
LDB7YBL006C YIL067CP40514 678 aa6.33□□□□□ -1.4
LDB7YBL006C MTR3P48240 250 aaPredicted RBP6.33□□□□□ -1.4
LDB7YBL006C BPL1P48445 690 aaPredicted RBP6.33□□□□□ -1.4
LDB7YBL006C MRM2P53123 320 aa6.33□□□□□ -1.4
LDB7YBL006C YLR460CP54007 376 aa6.33□□□□□ -1.4
LDB7YBL006C RNT1Q02555 471 aa6.33□□□□□ -1.4
LDB7YBL006C YPL107WQ02873 248 aa6.33□□□□□ -1.4
LDB7YBL006C CGI121Q03705 181 aaKnown RBP6.33□□□□□ -1.4
LDB7YBL006C FAR10Q06001 478 aa6.33□□□□□ -1.4
LDB7YBL006C YLL007CQ07799 665 aa6.33□□□□□ -1.4
LDB7YBL006C FDH1Q08911 376 aa6.33□□□□□ -1.4
LDB7YBL006C BSC1Q12140 328 aa6.33□□□□□ -1.4
LDB7YBL006C YVC1Q12324 675 aa6.33□□□□□ -1.4
LDB7YBL006C MMP1Q12372 583 aa6.33□□□□□ -1.4
LDB7YBL006C CAR1P00812 333 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C ARG81P05085 880 aa6.32□□□□□ -1.4
LDB7YBL006C UNG1P12887 359 aa6.32□□□□□ -1.4
LDB7YBL006C KRE6P32486 720 aa6.32□□□□□ -1.4
LDB7YBL006C RPT5P33297 434 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C SNU114P36048 1008 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C SCO2P38072 301 aa6.32□□□□□ -1.4
LDB7YBL006C GRE3P38715 327 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
LDB7YBL006C MID1P41821 548 aa6.32□□□□□ -1.4
LDB7YBL006C UBP6P43593 499 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C RPE1P46969 238 aa6.32□□□□□ -1.4
LDB7YBL006C TAF6P53040 516 aa6.32□□□□□ -1.4
LDB7YBL006C PDR16P53860 351 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C RPM2Q02773 1202 aa6.32□□□□□ -1.4
LDB7YBL006C EFR3Q03653 782 aaKnown RBP6.32□□□□□ -1.4
LDB7YBL006C WTM2Q12206 467 aa6.32□□□□□ -1.4
LDB7YBL006C SKS1Q12505 502 aa6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms