RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W PEX12Q04370 399 aa3.28□□□□□ -1.88
NUP60YAR002W TMN2Q04562 672 aa3.28□□□□□ -1.88
NUP60YAR002W HBT1Q07653 1046 aaKnown RBP3.28□□□□□ -1.88
NUP60YAR002W LOT6Q07923 191 aa3.28□□□□□ -1.88
NUP60YAR002W SMF3Q12078 473 aaPredicted RBP3.28□□□□□ -1.88
NUP60YAR002W PST1Q12355 444 aa3.28□□□□□ -1.88
NUP60YAR002W RPN6Q12377 434 aa3.28□□□□□ -1.88
NUP60YAR002W DBP10Q12389 995 aaKnown RBP3.28□□□□□ -1.88
NUP60YAR002W PFK27Q12471 397 aaPredicted RBP3.28□□□□□ -1.88
NUP60YAR002W Q0142Q9ZZW4 58 aa3.28□□□□□ -1.88
NUP60YAR002W RAD7P06779 565 aa3.27□□□□□ -1.89
NUP60YAR002W RHO1P06780 209 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W STE3P06783 470 aa3.27□□□□□ -1.89
NUP60YAR002W CPA1P07258 411 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W RAP1P11938 827 aa3.27□□□□□ -1.89
NUP60YAR002W YAP1P19880 650 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W TYR1P20049 452 aa3.27□□□□□ -1.89
NUP60YAR002W FAR1P21268 830 aa3.27□□□□□ -1.89
NUP60YAR002W EPT1P22140 391 aa3.27□□□□□ -1.89
NUP60YAR002W KIN3P22209 435 aa3.27□□□□□ -1.89
NUP60YAR002W CNA1P23287 553 aa3.27□□□□□ -1.89
NUP60YAR002W PUP3P25451 205 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W PEX3P28795 441 aa3.27□□□□□ -1.89
NUP60YAR002W CTS1P29029 562 aa3.27□□□□□ -1.89
NUP60YAR002W PTP2P29461 750 aa3.27□□□□□ -1.89
NUP60YAR002W APE2P32454 952 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W CDC5P32562 705 aa3.27□□□□□ -1.89
NUP60YAR002W YKR015CP36111 568 aa3.27□□□□□ -1.89
NUP60YAR002W YCR087C-AP37263 153 aa3.27□□□□□ -1.89
NUP60YAR002W SHM2P37291 469 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W YBR285WP38354 144 aa3.27□□□□□ -1.89
NUP60YAR002W RPP1P38786 293 aa3.27□□□□□ -1.89
NUP60YAR002W RBG1P39729 369 aa3.27□□□□□ -1.89
NUP60YAR002W MTW1P39731 289 aa3.27□□□□□ -1.89
NUP60YAR002W UTP18P40362 594 aaPredicted RBP3.27□□□□□ -1.89
NUP60YAR002W RIC1P40395 1056 aa3.27□□□□□ -1.89
NUP60YAR002W GAB1P41733 394 aa3.27□□□□□ -1.89
NUP60YAR002W ELP2P42935 788 aa3.27□□□□□ -1.89
NUP60YAR002W EMC2P47133 292 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W YJR096WP47137 282 aa3.27□□□□□ -1.89
NUP60YAR002W FLC3P53121 802 aa3.27□□□□□ -1.89
NUP60YAR002W YNR068CP53754 272 aa3.27□□□□□ -1.89
NUP60YAR002W MPS1P54199 764 aa3.27□□□□□ -1.89
NUP60YAR002W IRC15Q02733 499 aa3.27□□□□□ -1.89
NUP60YAR002W YMR010WQ03687 405 aa3.27□□□□□ -1.89
NUP60YAR002W CCE1Q03702 353 aa3.27□□□□□ -1.89
NUP60YAR002W YDR239CQ03780 787 aa3.27□□□□□ -1.89
NUP60YAR002W MTQ2Q03920 221 aaPredicted RBP3.27□□□□□ -1.89
NUP60YAR002W NDL1Q06568 189 aa3.27□□□□□ -1.89
NUP60YAR002W GPI11Q06636 219 aa3.27□□□□□ -1.89
NUP60YAR002W NSE1Q07913 336 aa3.27□□□□□ -1.89
NUP60YAR002W YDR056CQ12025 205 aa3.27□□□□□ -1.89
NUP60YAR002W MLH3Q12083 715 aa3.27□□□□□ -1.89
NUP60YAR002W YPL245WQ12179 454 aaKnown RBP3.27□□□□□ -1.89
NUP60YAR002W RRP42Q12277 265 aaPredicted RBP3.27□□□□□ -1.89
NUP60YAR002W NTO1Q12311 748 aa3.27□□□□□ -1.89
NUP60YAR002W YCL012CQ8J0M4 134 aa3.27□□□□□ -1.89
NUP60YAR002W TRP4P07285 380 aaPredicted RBP3.26□□□□□ -1.89
NUP60YAR002W KSS1P14681 368 aa3.26□□□□□ -1.89
NUP60YAR002W HCM1P25364 564 aa3.26□□□□□ -1.89
NUP60YAR002W ARP2P32381 391 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W ATP11P32453 318 aa3.26□□□□□ -1.89
NUP60YAR002W PRP19P32523 503 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W CYS4P32582 507 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W SSE2P32590 693 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W ATO2P32907 282 aa3.26□□□□□ -1.89
NUP60YAR002W SPC34P36131 295 aa3.26□□□□□ -1.89
NUP60YAR002W GLG1P36143 616 aa3.26□□□□□ -1.89
NUP60YAR002W ECM4P36156 370 aa3.26□□□□□ -1.89
NUP60YAR002W SOL2P37262 315 aa3.26□□□□□ -1.89
NUP60YAR002W SWD1P39706 426 aa3.26□□□□□ -1.89
NUP60YAR002W ERV46P39727 415 aa3.26□□□□□ -1.89
NUP60YAR002W THO1P40040 218 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W MOB1P40484 314 aa3.26□□□□□ -1.89
NUP60YAR002W YRB2P40517 327 aa3.26□□□□□ -1.89
NUP60YAR002W AIM22P47051 409 aa3.26□□□□□ -1.89
NUP60YAR002W SWC4P53201 476 aa3.26□□□□□ -1.89
NUP60YAR002W YGR015CP53208 328 aa3.26□□□□□ -1.89
NUP60YAR002W YNL260CP53846 198 aa3.26□□□□□ -1.89
NUP60YAR002W SPR6Q01684 191 aa3.26□□□□□ -1.89
NUP60YAR002W MET31Q03081 177 aa3.26□□□□□ -1.89
NUP60YAR002W NRG1Q03125 231 aa3.26□□□□□ -1.89
NUP60YAR002W VHS1Q03785 461 aa3.26□□□□□ -1.89
NUP60YAR002W YDR179W-AQ03983 463 aa3.26□□□□□ -1.89
NUP60YAR002W SMP3Q04174 516 aa3.26□□□□□ -1.89
NUP60YAR002W EMI1Q04406 187 aa3.26□□□□□ -1.89
NUP60YAR002W ASM4Q05166 528 aa3.26□□□□□ -1.89
NUP60YAR002W SSQ1Q05931 657 aaPredicted RBP3.26□□□□□ -1.89
NUP60YAR002W DTD1Q07648 150 aaKnown RBP3.26□□□□□ -1.89
NUP60YAR002W YLL007CQ07799 665 aa3.26□□□□□ -1.89
NUP60YAR002W GPR1Q12361 961 aa3.26□□□□□ -1.89
NUP60YAR002W SNF8Q12483 233 aa3.26□□□□□ -1.89
NUP60YAR002W MHT1Q12525 324 aa3.26□□□□□ -1.89
NUP60YAR002W YOL159C-AQ3E769 90 aa3.26□□□□□ -1.89
NUP60YAR002W SRN2Q99176 213 aa3.26□□□□□ -1.89
NUP60YAR002W ATP4P05626 244 aa3.26□□□□□ -1.89
NUP60YAR002W MSF1P08425 469 aa3.26□□□□□ -1.89
NUP60YAR002W KAR1P11927 433 aa3.26□□□□□ -1.89
NUP60YAR002W DAP2P18962 818 aa3.26□□□□□ -1.89
NUP60YAR002W URE2P23202 354 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms