RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C ISN1Q99312 450 aa2.24□□□□□ -2.05
CLN3YAL040C FAB1P34756 2278 aa2.24□□□□□ -2.05
CLN3YAL040C STT4P37297 1900 aa2.23□□□□□ -2.05
CLN3YAL040C PET122P10355 254 aa2.23□□□□□ -2.05
CLN3YAL040C GCY1P14065 312 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
CLN3YAL040C MRPL8P22353 238 aa2.23□□□□□ -2.05
CLN3YAL040C VPS34P22543 875 aa2.23□□□□□ -2.05
CLN3YAL040C DCC1P25559 380 aa2.23□□□□□ -2.05
CLN3YAL040C PEX34P25584 144 aa2.23□□□□□ -2.05
CLN3YAL040C GEX1P25596 615 aa2.23□□□□□ -2.05
CLN3YAL040C RAD14P28519 371 aa2.23□□□□□ -2.05
CLN3YAL040C PRE4P30657 266 aa2.23□□□□□ -2.05
CLN3YAL040C PHA2P32452 334 aa2.23□□□□□ -2.05
CLN3YAL040C AEP1P32493 518 aa2.23□□□□□ -2.05
CLN3YAL040C SIP2P34164 415 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C COY1P34237 679 aa2.23□□□□□ -2.05
CLN3YAL040C PTC1P35182 281 aa2.23□□□□□ -2.05
CLN3YAL040C GEX2P36173 615 aa2.23□□□□□ -2.05
CLN3YAL040C MRP21P38175 177 aa2.23□□□□□ -2.05
CLN3YAL040C FZO1P38297 855 aa2.23□□□□□ -2.05
CLN3YAL040C YHR033WP38690 423 aa2.23□□□□□ -2.05
CLN3YAL040C SEC31P38968 1273 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C YIL161WP40449 235 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C GCD10P41814 478 aa2.23□□□□□ -2.05
CLN3YAL040C YJR154WP47181 346 aa2.23□□□□□ -2.05
CLN3YAL040C TIS11P47977 285 aa2.23□□□□□ -2.05
CLN3YAL040C GLO1P50107 326 aa2.23□□□□□ -2.05
CLN3YAL040C EMC4P53073 190 aa2.23□□□□□ -2.05
CLN3YAL040C USE1P53146 245 aa2.23□□□□□ -2.05
CLN3YAL040C YGR066CP53242 292 aa2.23□□□□□ -2.05
CLN3YAL040C COP1P53622 1201 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C YNR068CP53754 272 aa2.23□□□□□ -2.05
CLN3YAL040C CDC14Q00684 551 aa2.23□□□□□ -2.05
CLN3YAL040C ACS1Q01574 713 aa2.23□□□□□ -2.05
CLN3YAL040C RLI1Q03195 608 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C TAF12Q03761 539 aa2.23□□□□□ -2.05
CLN3YAL040C FMN1Q03778 218 aa2.23□□□□□ -2.05
CLN3YAL040C RPN9Q04062 393 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C GTB1Q04924 702 aa2.23□□□□□ -2.05
CLN3YAL040C ASM4Q05166 528 aa2.23□□□□□ -2.05
CLN3YAL040C RIF2Q06208 395 aa2.23□□□□□ -2.05
CLN3YAL040C MCM21Q06675 368 aa2.23□□□□□ -2.05
CLN3YAL040C LUC7Q07508 261 aaPredicted RBP2.23□□□□□ -2.05
CLN3YAL040C AIM6Q07716 390 aa2.23□□□□□ -2.05
CLN3YAL040C SLF1Q12034 447 aaKnown RBP2.23□□□□□ -2.05
CLN3YAL040C YLR046CQ12253 270 aa2.23□□□□□ -2.05
CLN3YAL040C PSY3Q12318 242 aa2.23□□□□□ -2.05
CLN3YAL040C SUL2Q12325 893 aa2.23□□□□□ -2.05
CLN3YAL040C PEX11Q12462 236 aa2.23□□□□□ -2.05
CLN3YAL040C YJR112W-AQ3E743 109 aa2.23□□□□□ -2.05
CLN3YAL040C YDR034W-BQ6Q5X2 51 aa2.23□□□□□ -2.05
CLN3YAL040C CET1O13297 549 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C RHO2P06781 192 aa2.22□□□□□ -2.05
CLN3YAL040C MTF1P14908 341 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C MDM10P18409 493 aa2.22□□□□□ -2.05
CLN3YAL040C SEC15P22224 910 aa2.22□□□□□ -2.05
CLN3YAL040C AMD2P22580 549 aa2.22□□□□□ -2.05
CLN3YAL040C SPS22P25380 463 aa2.22□□□□□ -2.05
CLN3YAL040C SSE1P32589 693 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C PTM1P32857 523 aa2.22□□□□□ -2.05
CLN3YAL040C SGE1P33335 543 aa2.22□□□□□ -2.05
CLN3YAL040C LOT5P34234 306 aa2.22□□□□□ -2.05
CLN3YAL040C PHO11P35842 467 aa2.22□□□□□ -2.05
CLN3YAL040C FLO10P36170 1169 aa2.22□□□□□ -2.05
CLN3YAL040C PHO12P38693 467 aa2.22□□□□□ -2.05
CLN3YAL040C MUP3P38734 546 aa2.22□□□□□ -2.05
CLN3YAL040C YHR182WP38870 785 aa2.22□□□□□ -2.05
CLN3YAL040C BFR1P38934 470 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
CLN3YAL040C SLZ1P40167 298 aa2.22□□□□□ -2.05
CLN3YAL040C HPM1P40481 377 aa2.22□□□□□ -2.05
CLN3YAL040C ERG10P41338 398 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C BAP3P41815 604 aa2.22□□□□□ -2.05
CLN3YAL040C ZIM17P42844 174 aa2.22□□□□□ -2.05
CLN3YAL040C FET5P43561 622 aa2.22□□□□□ -2.05
CLN3YAL040C BIT61P47041 543 aa2.22□□□□□ -2.05
CLN3YAL040C YDL183CP48569 320 aa2.22□□□□□ -2.05
CLN3YAL040C SHE4P51534 789 aa2.22□□□□□ -2.05
CLN3YAL040C MRM2P53123 320 aa2.22□□□□□ -2.05
CLN3YAL040C PDR16P53860 351 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C INN1P53901 409 aa2.22□□□□□ -2.05
CLN3YAL040C RMI1Q02685 241 aa2.22□□□□□ -2.05
CLN3YAL040C YDR476CQ03362 224 aa2.22□□□□□ -2.05
CLN3YAL040C GOT1Q03554 138 aa2.22□□□□□ -2.05
CLN3YAL040C TVP15Q03860 143 aa2.22□□□□□ -2.05
CLN3YAL040C VBA4Q04602 768 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C RTN1Q04947 295 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C RQC1Q05468 723 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C LDB18Q07887 179 aa2.22□□□□□ -2.05
CLN3YAL040C YLR012CQ07927 99 aa2.22□□□□□ -2.05
CLN3YAL040C NUS1Q12063 375 aa2.22□□□□□ -2.05
CLN3YAL040C RTC5Q12108 567 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C MDY2Q12285 212 aa2.22□□□□□ -2.05
CLN3YAL040C TAF3Q12297 353 aa2.22□□□□□ -2.05
CLN3YAL040C NOT5Q12514 560 aaPredicted RBP2.22□□□□□ -2.05
CLN3YAL040C FMP27Q06179 2628 aa2.22□□□□□ -2.05
CLN3YAL040C YMR084WA2P2R3 262 aa2.22□□□□□ -2.05
CLN3YAL040C RPN13O13563 156 aa2.22□□□□□ -2.05
CLN3YAL040C ATP2P00830 511 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C RPL24AP04449 155 aaKnown RBP2.22□□□□□ -2.05
CLN3YAL040C SIR3P06701 978 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms