RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 SIP14410 1827 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 BRWD1Q9NSI6 2320 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 KCNA2P16389 499 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 RXRAP19793 462 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 COL9A1P20849 921 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 ARHGAP4P98171 946 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 FAM26DQ5JW98 314 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 C17orf80Q9BSJ5 609 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 OSBPL7Q9BZF2 842 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 SLC12A7Q9Y666 1083 aa27.49■■□□□ 1.99
LSM4-202ENST00000593564 ITGB5P18084 799 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 NECTIN1Q15223 517 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 CREB3L3Q68CJ9 461 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 FBXO22Q8NEZ5 403 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 APBB2Q92870 758 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 TOP1MTQ969P6 601 aa27.48■■□□□ 1.99
LSM4-202ENST00000593564 ATP9AO75110 1047 aa27.47■■□□□ 1.99
LSM4-202ENST00000593564 TCF7P36402 384 aaPredicted RBP27.47■■□□□ 1.99
LSM4-202ENST00000593564 TMTC3Q6ZXV5 915 aa27.47■■□□□ 1.99
LSM4-202ENST00000593564 RPAINQ86UA6 219 aa27.47■■□□□ 1.99
LSM4-202ENST00000593564 FANCBQ8NB91 859 aa27.47■■□□□ 1.99
LSM4-202ENST00000593564 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.46■■□□□ 1.99
LSM4-202ENST00000593564 SGMS1Q86VZ5 419 aa27.46■■□□□ 1.99
LSM4-202ENST00000593564 SEPT1Q8WYJ6 367 aa27.46■■□□□ 1.99
LSM4-202ENST00000593564 SAMD11Q96NU1 681 aa27.46■■□□□ 1.99
LSM4-202ENST00000593564 UBIAD1Q9Y5Z9 338 aa27.46■■□□□ 1.99
LSM4-202ENST00000593564 hCG_1642624A0A1W2PR95 340 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 MTMR1Q13613 665 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 UBE2SQ16763 222 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 TAF2Q6P1X5 1199 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 RAB11FIP4Q86YS3 637 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 YME1L1Q96TA2 773 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 LRRC2Q9BYS8 371 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 IFIH1Q9BYX4 1025 aaKnown RBP27.45■■□□□ 1.98
LSM4-202ENST00000593564 ANO2Q9NQ90 1003 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 COL4A6Q14031 1691 aa27.45■■□□□ 1.98
LSM4-202ENST00000593564 GSTTP1A0A1W2PQM5 241 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 SPDYE3A6NKU9 549 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 CCDC82Q8N4S0 544 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 ERAP1Q9NZ08 941 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 PCDHA6Q9UN73 950 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 PCDHA8Q9Y5H6 950 aa27.44■■□□□ 1.98
LSM4-202ENST00000593564 MAFGO15525 162 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 CHRNA1P02708 482 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 PPFIA1Q13136 1202 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 EPC2Q52LR7 807 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 RUFY4Q6ZNE9 571 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 HEATR3Q7Z4Q2 680 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 MICU3Q86XE3 530 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 MRPL38Q96DV4 380 aaKnown RBP27.43■■□□□ 1.98
LSM4-202ENST00000593564 C1QTNF1Q9BXJ1 281 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 JADE2Q9NQC1 790 aa27.43■■□□□ 1.98
LSM4-202ENST00000593564 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.42■■□□□ 1.98
LSM4-202ENST00000593564 UPP2O95045 317 aa27.42■■□□□ 1.98
LSM4-202ENST00000593564 SMARCAD1Q9H4L7 1026 aa27.42■■□□□ 1.98
LSM4-202ENST00000593564 UBE2ZQ9H832 354 aaPredicted RBP27.42■■□□□ 1.98
LSM4-202ENST00000593564 EHMT1Q9H9B1 1298 aa27.42■■□□□ 1.98
LSM4-202ENST00000593564 MBLAC1A4D2B0 266 aaPredicted RBP27.41■■□□□ 1.98
LSM4-202ENST00000593564 MARK3P27448 753 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 MGAT3Q09327 533 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 GRIK4Q16099 956 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 PTPROQ16827 1216 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 SYNE3Q6ZMZ3 975 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 RSPH3Q86UC2 560 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 GLG1Q92896 1179 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 PKD2L1Q9P0L9 805 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 TUBE1Q9UJT0 475 aa27.41■■□□□ 1.98
LSM4-202ENST00000593564 GHRP10912 638 aa27.4■■□□□ 1.98
LSM4-202ENST00000593564 RNF20Q5VTR2 975 aa27.4■■□□□ 1.98
LSM4-202ENST00000593564 TEX2Q8IWB9 1127 aa27.4■■□□□ 1.98
LSM4-202ENST00000593564 KAT6AQ92794 2004 aa27.4■■□□□ 1.98
LSM4-202ENST00000593564 H3BNC9 293 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 LEXMQ3ZCV2 418 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 MARCH8Q5T0T0 291 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 WWC2Q6AWC2 1192 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 APOA5Q6Q788 366 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 TMEM192Q8IY95 271 aa27.39■■□□□ 1.98
LSM4-202ENST00000593564 JPH1Q9HDC5 661 aaPredicted RBP27.39■■□□□ 1.98
LSM4-202ENST00000593564 RBM28Q9NW13 759 aaKnown RBP27.39■■□□□ 1.98
LSM4-202ENST00000593564 CNTNAP5Q8WYK1 1306 aa27.39■■□□□ 1.97
LSM4-202ENST00000593564 LPIN1Q14693 890 aa27.38■■□□□ 1.97
LSM4-202ENST00000593564 TIGD5Q53EQ6 642 aa27.38■■□□□ 1.97
LSM4-202ENST00000593564 BMP2KLQ5H9B9 411 aa27.38■■□□□ 1.97
LSM4-202ENST00000593564 IL17RAQ96F46 866 aa27.38■■□□□ 1.97
LSM4-202ENST00000593564 RPLP2P05387 115 aaKnown RBP27.37■■□□□ 1.97
LSM4-202ENST00000593564 GPM6BQ13491 265 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 PPP1R18Q6NYC8 613 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 DNAJB3Q8WWF6 145 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 NEK1Q96PY6 1258 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 MXRA8Q9BRK3 442 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 RIC8AQ9NPQ8 531 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 KCNH7Q9NS40 1196 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 SLC9A2Q9UBY0 812 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 RAPGEFL1Q9UHV5 662 aa27.37■■□□□ 1.97
LSM4-202ENST00000593564 KCNA5P22460 613 aa27.36■■□□□ 1.97
LSM4-202ENST00000593564 FBXO47Q5MNV8 452 aa27.36■■□□□ 1.97
LSM4-202ENST00000593564 PCYT2Q99447 389 aa27.36■■□□□ 1.97
LSM4-202ENST00000593564 RRN3P2A6NIE6 340 aa27.35■■□□□ 1.97
LSM4-202ENST00000593564 FOSP01100 380 aaPredicted RBP27.35■■□□□ 1.97
LSM4-202ENST00000593564 NAPAP54920 295 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms