RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ITGB3BPQ13352 177 aaPredicted RBP16.58■□□□□ 0.24
LITAF-208ENST00000571627 CAGE1Q8TC20 777 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 SEPT1Q8WYJ6 367 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
LITAF-208ENST00000571627 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
LITAF-208ENST00000571627 COL6A3P12111 3177 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 CHD9Q3L8U1 2897 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 PTPRSQ13332 1948 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 IGLV3-22A0A075B6J6 115 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 PFKFB2O60825 505 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 CKBP12277 381 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 HOXC8P31273 242 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 NEK4P51957 841 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 TRIM71Q2Q1W2 868 aaKnown RBP16.57■□□□□ 0.24
LITAF-208ENST00000571627 ZNF697Q5TEC3 545 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 LRRC8DQ7L1W4 858 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 PLA2G4DQ86XP0 818 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
LITAF-208ENST00000571627 BICD2Q8TD16 824 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 RNPEPQ9H4A4 650 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 SH3GLB2Q9NR46 395 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 MTMR10Q9NXD2 777 aa16.57■□□□□ 0.24
LITAF-208ENST00000571627 ZNF215Q9UL58 517 aaPredicted RBP16.57■□□□□ 0.24
LITAF-208ENST00000571627 NFASCO94856 1347 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.56■□□□□ 0.24
LITAF-208ENST00000571627 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.56■□□□□ 0.24
LITAF-208ENST00000571627 ZBBXA8MT70 800 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
LITAF-208ENST00000571627 TREHO43280 583 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 CYP3A4P08684 503 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 SELPP16109 830 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 RFC2P35250 354 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 PBX2P40425 430 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 ACTR2P61160 394 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 RBL2Q08999 1139 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 GPNMBQ14956 572 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 ZNF618Q5T7W0 954 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 MCTP2Q6DN12 878 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 SERINC5Q86VE9 423 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 NECAB1Q8N987 351 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 GLG1Q92896 1179 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 PCYT2Q99447 389 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 FTOQ9C0B1 505 aaKnown RBP eCLIP16.56■□□□□ 0.24
LITAF-208ENST00000571627 WDR81Q562E7 1941 aa16.56■□□□□ 0.24
LITAF-208ENST00000571627 CDH23Q9H251 3354 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 CDKL5O76039 1030 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 CTDNEP1O95476 244 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 PFKMP08237 780 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 DNAJB2P25686 324 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
LITAF-208ENST00000571627 NPY5RQ15761 445 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 ME3Q16798 604 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 TRAF7Q6Q0C0 670 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 LMBR1Q8WVP7 490 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 MTIF3Q9H2K0 278 aaKnown RBP16.55■□□□□ 0.24
LITAF-208ENST00000571627 TTYH1Q9H313 450 aaPredicted RBP16.55■□□□□ 0.24
LITAF-208ENST00000571627 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 KCNJ14Q9UNX9 436 aa16.55■□□□□ 0.24
LITAF-208ENST00000571627 SIP14410 1827 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 STK36Q9NRP7 1315 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 IPO5O00410 1097 aaKnown RBP16.54■□□□□ 0.24
LITAF-208ENST00000571627 EDIL3O43854 480 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 NBNO60934 754 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 CCNE2O96020 404 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 THPOP40225 353 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 MBTPS1Q14703 1052 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 PRR16Q569H4 304 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 IL27Q8NEV9 243 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 GUCD1Q96NT3 240 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 PBX4Q9BYU1 374 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 ERAP1Q9NZ08 941 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 SLC4A7Q9Y6M7 1214 aa16.54■□□□□ 0.24
LITAF-208ENST00000571627 MYH9P35579 1960 aaKnown RBP16.54■□□□□ 0.24
LITAF-208ENST00000571627 DHX15O43143 795 aaKnown RBP16.53■□□□□ 0.24
LITAF-208ENST00000571627 LGR5O75473 907 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 CTSHP09668 335 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 ACTN1P12814 892 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 RABGGTBP53611 331 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 ADAM17P78536 824 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 PPFIA1Q13136 1202 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 TCTN1Q2MV58 587 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 TBCKQ8TEA7 893 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 GTF3C6Q969F1 213 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 LENG9Q96B70 501 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 SEMA6BQ9H3T3 888 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 SMARCAD1Q9H4L7 1026 aa16.53■□□□□ 0.24
LITAF-208ENST00000571627 MICAL3Q7RTP6 2002 aa16.52■□□□□ 0.24
LITAF-208ENST00000571627 M0R2N6 131 aa16.52■□□□□ 0.24
LITAF-208ENST00000571627 GNAT1P11488 350 aa16.52■□□□□ 0.24
LITAF-208ENST00000571627 CIITAP33076 1130 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms