RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 ZNF689Q96CS4 500 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-212ENST00000479586 PLVAPQ9BX97 442 aa20.17■□□□□ 0.82
HMGN1-212ENST00000479586 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
HMGN1-212ENST00000479586 DMDP11532 3685 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 KIAA1671Q9BY89 1806 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-212ENST00000479586 GNAT1P11488 350 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 ADAM17P78536 824 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 SIGLEC14Q08ET2 396 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 COASYQ13057 564 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 EFHBQ8N7U6 833 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 ASIC4Q96FT7 647 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 BARX2Q9UMQ3 279 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-212ENST00000479586 USP15Q9Y4E8 981 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-212ENST00000479586 DOCK5Q9H7D0 1870 aa20.16■□□□□ 0.82
HMGN1-212ENST00000479586 TTC3P53804 2025 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 NOP56O00567 594 aaKnown RBP20.15■□□□□ 0.82
HMGN1-212ENST00000479586 ENPP3O14638 875 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 GLP2RO95838 553 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 ITGB1P05556 798 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 ATOH1Q92858 354 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-212ENST00000479586 PPP2R3CQ969Q6 453 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-212ENST00000479586 EHMT1Q9H9B1 1298 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 TELO2Q9Y4R8 837 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 MRPL42Q9Y6G3 142 aaKnown RBP20.15■□□□□ 0.82
HMGN1-212ENST00000479586 PLXNA3P51805 1871 aa20.15■□□□□ 0.82
HMGN1-212ENST00000479586 RIF1Q5UIP0 2472 aaKnown RBP20.15■□□□□ 0.82
HMGN1-212ENST00000479586 DGKIO75912 1065 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 PARP1P09874 1014 aaKnown RBP20.14■□□□□ 0.81
HMGN1-212ENST00000479586 CCND2P30279 289 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 NRIP1P48552 1158 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 LPIN1Q14693 890 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 RUFY4Q6ZNE9 571 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 SPPL3Q8TCT6 385 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 P2RX5Q93086 422 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 RPGRIP1Q96KN7 1286 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 USP26Q9BXU7 913 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 VPS13AQ96RL7 3174 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 CACNA1AO00555 2505 aa20.14■□□□□ 0.81
HMGN1-212ENST00000479586 KDM4AO75164 1064 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 AVPR2P30518 371 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 FOXK2Q01167 660 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 MGAT3Q09327 533 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-212ENST00000479586 RBM23Q86U06 439 aaKnown RBP20.13■□□□□ 0.81
HMGN1-212ENST00000479586 IQCA1Q86XH1 822 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 ENAHQ8N8S7 591 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-212ENST00000479586 GPR20Q99678 358 aa20.13■□□□□ 0.81
HMGN1-212ENST00000479586 PHF7Q9BWX1 381 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-212ENST00000479586 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 H0Y858 1186 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
HMGN1-212ENST00000479586 METTL7BQ6UX53 244 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 CYFIP1Q7L576 1253 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 TLR9Q9NR96 1032 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 MAP3K20Q9NYL2 800 aaKnown RBP20.12■□□□□ 0.81
HMGN1-212ENST00000479586 PCDHA1Q9Y5I3 950 aa20.12■□□□□ 0.81
HMGN1-212ENST00000479586 DCHS1Q96JQ0 3298 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 POF1BQ8WVV4 589 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 ZSCAN10Q96SZ4 725 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-212ENST00000479586 ZNF215Q9UL58 517 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-212ENST00000479586 PCDHB15Q9Y5E8 787 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 LAMA4Q16363 1823 aa20.11■□□□□ 0.81
HMGN1-212ENST00000479586 FAM186AA6NE01 2351 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 B4E1Z4 1266 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 PDGFBP01127 241 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-212ENST00000479586 ICAM3P32942 547 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
HMGN1-212ENST00000479586 RBM10P98175 930 aaKnown RBP20.1■□□□□ 0.81
HMGN1-212ENST00000479586 SP4Q02446 784 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 PAN2Q504Q3 1202 aaKnown RBP20.1■□□□□ 0.81
HMGN1-212ENST00000479586 NAALADL2Q58DX5 795 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 ASCL5Q7RTU5 278 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
HMGN1-212ENST00000479586 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 IRF2BPLQ9H1B7 796 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
HMGN1-212ENST00000479586 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 NRCAMQ92823 1304 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 ZBTB5O15062 677 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 NEDD9Q14511 834 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 PTPN21Q16825 1174 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 GNPTABQ3T906 1256 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 FBXO47Q5MNV8 452 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 SAMD3Q8N6K7 520 aa20.09■□□□□ 0.81
HMGN1-212ENST00000479586 INPP4AQ96PE3 977 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-212ENST00000479586 AGO3Q9H9G7 860 aaKnown RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms