RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 TACO1Q9BSH4 297 aaKnown RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 STIM2Q9P246 746 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 SNX12Q9UMY4 172 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 MYH14Q7Z406 1995 aaKnown RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 STXBP3O00186 592 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 CCDC174Q6PII3 467 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 PEX26Q7Z412 305 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 CCDC84Q86UT8 332 aaPredicted RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 FAM118BQ9BPY3 351 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 MED4Q9NPJ6 270 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 BAZ2AQ9UIF9 1905 aaKnown RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 FLT1P17948 1338 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 ABCA3Q99758 1704 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 OPA1O60313 960 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 SRGNP10124 158 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 MCM3P25205 808 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 ERFP50548 548 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 GALNT17Q6IS24 598 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 TMED8Q6PL24 325 aaPredicted RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 AEBP2Q6ZN18 517 aaPredicted RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 KCND1Q9NSA2 647 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 FAM184BQ9ULE4 1060 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 NOVA2Q9UNW9 492 aaKnown RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 PLAAQ9Y263 795 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 RSPH10B2B2RC85 870 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 RSPH10BP0C881 870 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 ZKSCAN8Q15776 578 aaPredicted RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 HP1BP3Q5SSJ5 553 aaPredicted RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 TBC1D22AQ8WUA7 517 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 RNPC3Q96LT9 517 aaKnown RBP10.71□□□□□ -0.69
CMC1-209ENST00000477739 TRIM51Q9BSJ1 452 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 PSTPIP2Q9H939 334 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 DBNDD1Q9H9R9 158 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 USP40Q9NVE5 1235 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 RGL1Q9NZL6 768 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 TCEAL9Q9UHQ7 104 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 PCDHAC2Q9Y5I4 1007 aa10.71□□□□□ -0.69
CMC1-209ENST00000477739 ZBTB39O15060 712 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 ATP8B1O43520 1251 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 TBCAO75347 108 aaKnown RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 TRIM49P0CI25 452 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 TRIM49CP0CI26 452 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 TAF1P21675 1872 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 PBX1P40424 430 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 IRX3P78415 501 aaPredicted RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 KCNA1Q09470 495 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 SLC35G1Q2M3R5 365 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 SEPT12Q8IYM1 358 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 MSANTD4Q8NCY6 345 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 GIMAP8Q8ND71 665 aaPredicted RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 PPM1EQ8WY54 764 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 RTFDC1Q9BY42 306 aaPredicted RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 LUC7LQ9NQ29 371 aaKnown RBP10.71□□□□□ -0.7
CMC1-209ENST00000477739 TMOD4Q9NZQ9 345 aa10.71□□□□□ -0.7
CMC1-209ENST00000477739 C4AP0C0L4 1744 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 C4BP0C0L5 1744 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 RBAK-RBAKDNI3L0D1 243 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 DAPK3O43293 454 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 TRIM37O94972 964 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 HLA-DOAP06340 250 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 CTTNQ14247 550 aaKnown RBP10.7□□□□□ -0.7
CMC1-209ENST00000477739 IFT20Q8IY31 132 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 ANKRD42Q8N9B4 389 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 NHSL1Q5SYE7 1610 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 ITGA4P13612 1032 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 PLTPP55058 493 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 SNX1Q13596 522 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 MAN2A1Q16706 1144 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 C2CD6Q53TS8 623 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 NSMFQ6X4W1 530 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 BHMT2Q9H2M3 363 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 THAP9Q9H5L6 903 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 PALM3A6NDB9 673 aaPredicted RBP10.7□□□□□ -0.7
CMC1-209ENST00000477739 BBOX1O75936 387 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 PPP4CP60510 307 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 HDLBPQ00341 1268 aaKnown RBP10.7□□□□□ -0.7
CMC1-209ENST00000477739 AMPD2Q01433 879 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 LRRC14Q15048 493 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 MYCT1Q8N699 235 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 TBC1D16Q8TBP0 767 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 CD248Q9HCU0 757 aa10.7□□□□□ -0.7
CMC1-209ENST00000477739 PDS5AQ29RF7 1337 aaKnown RBP10.69□□□□□ -0.7
CMC1-209ENST00000477739 CETN3O15182 167 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 RAD51CO43502 376 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 KLRC4O43908 158 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 YY1P25490 414 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 COASYQ13057 564 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 TADA2BQ86TJ2 420 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 DHTKD1Q96HY7 919 aaPredicted RBP10.69□□□□□ -0.7
CMC1-209ENST00000477739 CABS1Q96KC9 395 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 POLLQ9UGP5 575 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 BAIAP2L1Q9UHR4 511 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
CMC1-209ENST00000477739 PHF20L1A8MW92 1017 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms