RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 HYOU1Q9Y4L1 999 aa16.28■□□□□ 0.2
PRPF38B-204ENST00000467302 AKR1B10O60218 316 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 POLD1P28340 1107 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 SLC1A4P43007 532 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 PDXDC1Q6P996 788 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 DYMQ7RTS9 669 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 MTMR8Q96EF0 704 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 CSRNP1Q96S65 589 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 NUDT12Q9BQG2 462 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 DEF6Q9H4E7 631 aa16.27■□□□□ 0.2
PRPF38B-204ENST00000467302 SSU72P8A0A1W2PR75 194 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 PPP1R11O60927 126 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 GDF11O95390 407 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 TDP2O95551 362 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 PSMD2Q13200 908 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 TMEM266Q2M3C6 531 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 RBM26Q5T8P6 1007 aaKnown RBP16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 HGSNATQ68CP4 663 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 KCNK18Q7Z418 384 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 AGBL3Q8NEM8 1001 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 DDX12PQ92771 950 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 POTEMA6NI47 508 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 RBAK-RBAKDNI3L0D1 243 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 PPFIA4O75335 1185 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 MAGEA1P43355 309 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 KCNMA1Q12791 1236 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 C10orf67Q8IYJ2 551 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 MTMR14Q8NCE2 650 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 FAM151AQ8WW52 585 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 TLR10Q9BXR5 811 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 ZNF70Q9UC06 446 aaPredicted RBP16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 SYNPO2Q9UMS6 1093 aa16.26■□□□□ 0.19
PRPF38B-204ENST00000467302 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 ZBTB7AO95365 584 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 DALRD3Q5D0E6 543 aaKnown RBP16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 FKBP1CQ5VVH2 108 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 RNF10Q8N5U6 811 aaKnown RBP16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 CUL5Q93034 780 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 SH3GL2Q99962 352 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 RAB34Q9BZG1 259 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 LRRC27Q9C0I9 530 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 MTFR1LQ9H019 292 aa16.25■□□□□ 0.19
PRPF38B-204ENST00000467302 CLRN2A0PK11 232 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 F5H6K3 240 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 TNFRSF8P28908 595 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 GFPT1Q06210 699 aaPredicted RBP16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 KLRC3Q07444 240 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 KLHDC7AQ5VTJ3 777 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 KRT79Q5XKE5 535 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 HAUS3Q68CZ6 603 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 SND1Q7KZF4 910 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 FAM76AQ8TAV0 307 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 SNX29Q8TEQ0 813 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 DNAJC19Q96DA6 116 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 HINFPQ9BQA5 517 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 GH2P01242 217 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 CXCR5P32302 372 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 LRRC41Q15345 812 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 ECM1Q16610 540 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 SYN2Q92777 582 aaPredicted RBP16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 TSG101Q99816 390 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 GLT8D2Q9H1C3 349 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 SMARCAL1Q9NZC9 954 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 STIM2Q9P246 746 aa16.24■□□□□ 0.19
PRPF38B-204ENST00000467302 GOLGA6CA6NDK9 693 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 NCK2O43639 380 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 NOL4O94818 638 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 GOLGA6DP0CG33 693 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 EPHB4P54760 987 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 UBE2SQ16763 222 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 QRICH1Q2TAL8 776 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 EMBQ6PCB8 327 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 NOX5Q96PH1 765 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 TAOK3Q9H2K8 898 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 GOLGA6AQ9NYA3 693 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 EHD2Q9NZN4 543 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 RSPH14Q9UHP6 348 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
PRPF38B-204ENST00000467302 CNTNAP1P78357 1384 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms