RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 NEDD9Q14511 834 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 MTFR1Q15390 333 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 CELF3Q5SZQ8 465 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ATL3Q6DD88 541 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 GIMAP8Q8ND71 665 aaPredicted RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ETNPPLQ8TBG4 499 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 HAS1Q92839 578 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 SLC5A5Q92911 643 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF333Q96JL9 665 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 FAM20AQ96MK3 541 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF396Q96N95 335 aaPredicted RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ZNF577Q9BSK1 485 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 UNC93B1Q9H1C4 597 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 KCNMB3Q9NPA1 279 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 CHMP5Q9NZZ3 219 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 TFIP11Q9UBB9 837 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 DDX20Q9UHI6 824 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 Q9Y3F1 56 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 ATP6V1DQ9Y5K8 247 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 CLIC4Q9Y696 253 aa8.54□□□□□ -1.04
AC004540.1-206ENST00000448056 PLXNA1Q9UIW2 1896 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 ARHGAP33O14559 1287 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 DYNC1LI2O43237 492 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 MARCH6O60337 910 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 MSCO60682 206 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 BAG4O95429 457 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 GH1P01241 217 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 UBA1P22314 1058 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 FECHP22830 423 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 PTGS1P23219 599 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 DNM1Q05193 864 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 ITGB3BPQ13352 177 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 SF3A1Q15459 793 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 CALCRLQ16602 461 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 GJC2Q5T442 439 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 ANO1Q5XXA6 986 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 CYFIP1Q7L576 1253 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 DHX37Q8IY37 1157 aaKnown RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 SLFN12Q8IYM2 578 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 COPS5Q92905 334 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 GJA10Q969M2 543 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 EMID1Q96A84 441 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 RIT2Q99578 217 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 SDF4Q9BRK5 362 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 RNF208Q9H0X6 261 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 TMEM60Q9H2L4 133 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 MLXIPQ9HAP2 919 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 PAK6Q9NQU5 681 aaPredicted RBP8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 TBC1D22BQ9NU19 505 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 PKD2L1Q9P0L9 805 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 NFASCO94856 1347 aa8.53□□□□□ -1.04
AC004540.1-206ENST00000448056 LAD1O00515 517 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 SORBS3O60504 671 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 GAS7O60861 476 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 PSMD10O75832 226 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 FARP2O94887 1054 aaPredicted RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 GGPS1O95749 300 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 BMP15O95972 392 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 OR52Z1P0C646 297 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 RARBP10826 455 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 TXKP42681 527 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 GJA9P57773 515 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 NKX3-2P78367 333 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 ATP2C1P98194 919 aaPredicted RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 CEBPZQ03701 1054 aaKnown RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 ARHGAP1Q07960 439 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 SLC39A14Q15043 492 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 PTPAQ15257 358 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 IL17AQ16552 155 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 LRCH2Q5VUJ6 765 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 METTL7BQ6UX53 244 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 LENG1Q96BZ8 264 aaPredicted RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 USP28Q96RU2 1077 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 FTOQ9C0B1 505 aaKnown RBP eCLIP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 AP5M1Q9H0R1 490 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 TTC12Q9H892 705 aaPredicted RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 XPNPEP3Q9NQH7 507 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 CFAP45Q9UL16 551 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 PCDHA12Q9UN75 941 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 CEP131Q9UPN4 1083 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 MYH7BA7E2Y1 1941 aa8.52□□□□□ -1.05
AC004540.1-206ENST00000448056 A6NJR5 290 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 CTAGE5O15320 804 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PPFIA4O75335 1185 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 ATG7O95352 703 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 CCNE2O96020 404 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 PGK1P00558 417 aa8.51□□□□□ -1.05
AC004540.1-206ENST00000448056 GJB1P08034 283 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms