RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 ZNF200P98182 395 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 ST3GAL1Q11201 340 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 PPIGQ13427 754 aaKnown RBP eCLIP11.51□□□□□ -0.575e-8■■■■■ 31.2
CTDSPL-207ENST00000447745 HIC1Q14526 733 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 RABEP1Q15276 862 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 LRIT3Q3SXY7 679 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 PRR16Q569H4 304 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 C16orf59Q7L2K0 433 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 CCDC83Q8IWF9 413 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 TBCKQ8TEA7 893 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 WNT8AQ9H1J5 351 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 RNPEPQ9H4A4 650 aa11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 JPH1Q9HDC5 661 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 ZNF215Q9UL58 517 aaPredicted RBP11.51□□□□□ -0.57
CTDSPL-207ENST00000447745 DDX39AO00148 427 aaKnown RBP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 IPO5O00410 1097 aaKnown RBP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SOX1O00570 391 aaPredicted RBP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SMIM10L2AP0DMW4 78 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SMIM10L2BP0DMW5 78 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 ACTR2P61160 394 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 BFSP2Q13515 415 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 NONOQ15233 471 aaKnown RBP eCLIP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 TMEM240Q5SV17 173 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 KRT25Q7Z3Z0 450 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 DHX38Q92620 1227 aaKnown RBP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 GLG1Q92896 1179 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 LENG9Q96B70 501 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SCLYQ96I15 445 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 ZNF577Q9BSK1 485 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SMARCAD1Q9H4L7 1026 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 TBC1D22BQ9NU19 505 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 SETD4Q9NVD3 440 aa11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 LAMA2P24043 3122 aaKnown RBP11.5□□□□□ -0.57
CTDSPL-207ENST00000447745 CYP3A7-CYP3A51PA0A087WV96 503 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 CCDC194A0A1B0GVG4 234 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 PITPNM1O00562 1244 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 LGR5O75473 907 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 ATG7O95352 703 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 CCNE2O96020 404 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 IQCF3P0C7M6 154 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 CYP3A7P24462 503 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 HOXD11P31277 338 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 SETQ01105 290 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 PTK7Q13308 1070 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 INF2Q27J81 1249 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 ATP6V0A1Q93050 837 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 PCYT2Q99447 389 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.49□□□□□ -0.579e-6■□□□□ 9.3
CTDSPL-207ENST00000447745 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 ERAP1Q9NZ08 941 aa11.49□□□□□ -0.57
CTDSPL-207ENST00000447745 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 MSH4O15457 936 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 TREHO43280 583 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 ST18O60284 1047 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 TDP2O95551 362 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 FGBP02675 491 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 GNAT1P11488 350 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 MARK3P27448 753 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 HOXC8P31273 242 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 KRT2P35908 639 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 STAT5BP51692 787 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 FOSBP53539 338 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 Q4G0T1 1027 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 ABHD15Q6UXT9 468 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 PLPPR4Q7Z2D5 763 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 SERINC5Q86VE9 423 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 CAGE1Q8TC20 777 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 AFAP1L1Q8TED9 768 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 WNT8BQ93098 351 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 AZI2Q9H6S1 392 aa11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL-207ENST00000447745 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 NRCAMQ92823 1304 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 IGKV6D-21A0A0A0MT36 114 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 CKBP12277 381 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 SELPP16109 830 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 ADAM17P78536 824 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 NR5A1Q13285 461 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 TRIM29Q14134 588 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 LETM2Q2VYF4 491 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 EARS2Q5JPH6 523 aaKnown RBP11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 KRT40Q6A162 431 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 ZNF746Q6NUN9 644 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 SWSAP1Q6NVH7 229 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 PSRC1Q6PGN9 363 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 PIK3AP1Q6ZUJ8 805 aa11.47□□□□□ -0.57
CTDSPL-207ENST00000447745 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms