RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 ZNF689Q96CS4 500 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-203ENST00000380748 PLVAPQ9BX97 442 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 KAT14Q9H8E8 782 aa20.17■□□□□ 0.82
HMGN1-203ENST00000380748 DMDP11532 3685 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 KIAA1671Q9BY89 1806 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 PPP1R11O60927 126 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-203ENST00000380748 GNAT1P11488 350 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 ADAM17P78536 824 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 ARHGAP4P98171 946 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 SIGLEC14Q08ET2 396 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 COASYQ13057 564 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 EFHBQ8N7U6 833 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 LMBR1Q8WVP7 490 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 ASIC4Q96FT7 647 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 BARX2Q9UMQ3 279 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-203ENST00000380748 USP15Q9Y4E8 981 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-203ENST00000380748 DOCK5Q9H7D0 1870 aa20.16■□□□□ 0.82
HMGN1-203ENST00000380748 TTC3P53804 2025 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 NOP56O00567 594 aaKnown RBP20.15■□□□□ 0.82
HMGN1-203ENST00000380748 ENPP3O14638 875 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 GLP2RO95838 553 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 ITGB1P05556 798 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 ATOH1Q92858 354 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-203ENST00000380748 PPP2R3CQ969Q6 453 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 RNF41Q9H4P4 317 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-203ENST00000380748 EHMT1Q9H9B1 1298 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 TELO2Q9Y4R8 837 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 MRPL42Q9Y6G3 142 aaKnown RBP20.15■□□□□ 0.82
HMGN1-203ENST00000380748 PLXNA3P51805 1871 aa20.15■□□□□ 0.82
HMGN1-203ENST00000380748 RIF1Q5UIP0 2472 aaKnown RBP20.15■□□□□ 0.82
HMGN1-203ENST00000380748 DGKIO75912 1065 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 PARP1P09874 1014 aaKnown RBP20.14■□□□□ 0.81
HMGN1-203ENST00000380748 CCND2P30279 289 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 NRIP1P48552 1158 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 LPIN1Q14693 890 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 RUFY4Q6ZNE9 571 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 SPPL3Q8TCT6 385 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 P2RX5Q93086 422 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 RPGRIP1Q96KN7 1286 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 USP26Q9BXU7 913 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 VPS13AQ96RL7 3174 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 CACNA1AO00555 2505 aa20.14■□□□□ 0.81
HMGN1-203ENST00000380748 KDM4AO75164 1064 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 AVPR2P30518 371 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 FOXK2Q01167 660 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 MGAT3Q09327 533 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-203ENST00000380748 RBM23Q86U06 439 aaKnown RBP20.13■□□□□ 0.81
HMGN1-203ENST00000380748 IQCA1Q86XH1 822 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 ENAHQ8N8S7 591 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-203ENST00000380748 GPR20Q99678 358 aa20.13■□□□□ 0.81
HMGN1-203ENST00000380748 PHF7Q9BWX1 381 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-203ENST00000380748 TRIM6-TRIM34B2RNG4 842 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 H0Y858 1186 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
HMGN1-203ENST00000380748 METTL7BQ6UX53 244 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 CYFIP1Q7L576 1253 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 STAG2Q8N3U4 1231 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 KLHL23Q8NBE8 558 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 LINC01599Q8WXQ3 324 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 TLR9Q9NR96 1032 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 MAP3K20Q9NYL2 800 aaKnown RBP20.12■□□□□ 0.81
HMGN1-203ENST00000380748 PCDHA1Q9Y5I3 950 aa20.12■□□□□ 0.81
HMGN1-203ENST00000380748 DCHS1Q96JQ0 3298 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 CCDC178Q5BJE1 867 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 POF1BQ8WVV4 589 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 ZSCAN10Q96SZ4 725 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-203ENST00000380748 ZNF215Q9UL58 517 aaPredicted RBP20.11■□□□□ 0.81
HMGN1-203ENST00000380748 PCDHB15Q9Y5E8 787 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 LAMA4Q16363 1823 aa20.11■□□□□ 0.81
HMGN1-203ENST00000380748 FAM186AA6NE01 2351 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 B4E1Z4 1266 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 PDGFBP01127 241 aaPredicted RBP20.1■□□□□ 0.81
HMGN1-203ENST00000380748 ICAM3P32942 547 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 MRPS9P82933 396 aaKnown RBP20.1■□□□□ 0.81
HMGN1-203ENST00000380748 RBM10P98175 930 aaKnown RBP20.1■□□□□ 0.81
HMGN1-203ENST00000380748 SP4Q02446 784 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 PAN2Q504Q3 1202 aaKnown RBP20.1■□□□□ 0.81
HMGN1-203ENST00000380748 NAALADL2Q58DX5 795 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 ASCL5Q7RTU5 278 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 CMTR2Q8IYT2 770 aaKnown RBP20.1■□□□□ 0.81
HMGN1-203ENST00000380748 MTMR8Q96EF0 704 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 IRF2BPLQ9H1B7 796 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
HMGN1-203ENST00000380748 PLXNA4Q9HCM2 1894 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 NRCAMQ92823 1304 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 SPATA31C2B4DYI2 1134 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 ZBTB5O15062 677 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 NEDD9Q14511 834 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 PTPN21Q16825 1174 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 GNPTABQ3T906 1256 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 FBXO47Q5MNV8 452 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 SAMD3Q8N6K7 520 aa20.09■□□□□ 0.81
HMGN1-203ENST00000380748 INPP4AQ96PE3 977 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms