RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TTBK2Q6IQ55 1244 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 ZNF572Q7Z3I7 529 aaPredicted RBP15.41■□□□□ 0.06
HMGCL-203ENST00000374490 NOA1Q8NC60 698 aaKnown RBP15.41■□□□□ 0.06
HMGCL-203ENST00000374490 ERMNQ8TAM6 284 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 LACRTQ9GZZ8 138 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 ZNRF3Q9ULT6 936 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 PCDHA13Q9Y5I0 950 aa15.41■□□□□ 0.06
HMGCL-203ENST00000374490 COL4A5P29400 1685 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 PJA2O43164 708 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 AKR1B10O60218 316 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 QRICH1Q2TAL8 776 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 KCNK18Q7Z418 384 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 CLEC10AQ8IUN9 316 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 OGFOD1Q8N543 542 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 KCTD17Q8N5Z5 321 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 NUDT12Q9BQG2 462 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 ANO3Q9BYT9 981 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 KCNMB3Q9NPA1 279 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 MED4Q9NPJ6 270 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 TMOD2Q9NZR1 351 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 CEP72Q9P209 647 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 ARHGAP20Q9P2F6 1191 aa15.4■□□□□ 0.06
HMGCL-203ENST00000374490 RCCD1A6NED2 376 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 ENC1O14682 589 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 FOSP01100 380 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 VIL1P09327 827 aaKnown RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 PLA2G4BP0C869 781 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 TCP1P17987 556 aaKnown RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 EIF4A3P38919 411 aaKnown RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 SLC1A4P43007 532 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 NFIAQ12857 509 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 CASP8Q14790 479 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 EDRF1Q3B7T1 1238 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 HSP90B2PQ58FF3 399 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 SLFN13Q68D06 897 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 CACNA2D4Q7Z3S7 1137 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 ZC3H3Q8IXZ2 948 aaKnown RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 FAM71BQ8TC56 605 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 BAP1Q92560 729 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 MMS19Q96T76 1030 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 TRIM34Q9BYJ4 488 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 FAM207AQ9NSI2 230 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 TSKSQ9UJT2 592 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 SNX12Q9UMY4 172 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 TRAF5O00463 557 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 SLC16A2P36021 539 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 MAP2K1Q02750 393 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 CDC37Q16543 378 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 KCTD1Q719H9 257 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 RRAGAQ7L523 313 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 RNF10Q8N5U6 811 aaKnown RBP15.39■□□□□ 0.05
HMGCL-203ENST00000374490 TANGO6Q9C0B7 1094 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 PI4KBQ9UBF8 816 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 HDAC6Q9UBN7 1215 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 SYNPO2Q9UMS6 1093 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 PCDHA1Q9Y5I3 950 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 PCDHAC2Q9Y5I4 1007 aa15.39■□□□□ 0.05
HMGCL-203ENST00000374490 MACROD2A1Z1Q3 448 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 FRMD3A2A2Y4 597 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 EPS15P42566 896 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 CACNB3P54284 484 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 CYP27A1Q02318 531 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 TCP10Q12799 353 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 TRAF1Q13077 416 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
HMGCL-203ENST00000374490 SLC9C1Q4G0N8 1177 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 SFMBT2Q5VUG0 894 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 TMEM179Q6ZVK1 233 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 GPBP1Q86WP2 473 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 MMGT1Q8N4V1 131 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 EEF2KMTQ96G04 330 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 PDE11AQ9HCR9 933 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 HYOU1Q9Y4L1 999 aa15.38■□□□□ 0.05
HMGCL-203ENST00000374490 H3BQF6 201 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 ZNF263O14978 683 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 SERPING1P05155 500 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 SSBP05455 408 aaKnown RBP eCLIP15.37■□□□□ 0.05
HMGCL-203ENST00000374490 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
HMGCL-203ENST00000374490 CYP11B2P19099 503 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 MAGEA1P43355 309 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 MMP14P50281 582 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 DLGAP5Q15398 846 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 ECM1Q16610 540 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 Q4G0T1 1027 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 TATDN1Q6P1N9 297 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 PAXIP1Q6ZW49 1069 aaPredicted RBP15.37■□□□□ 0.05
HMGCL-203ENST00000374490 GMCL1P1Q8NEA9 526 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 AGBL3Q8NEM8 1001 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 GMCL1Q96IK5 515 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 AMNQ9BXJ7 453 aa15.37■□□□□ 0.05
HMGCL-203ENST00000374490 TDRD3Q9H7E2 651 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms