RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 CALCRLQ16602 461 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 TMED8Q6PL24 325 aaPredicted RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 YTHDF3Q7Z739 585 aaKnown RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 CCDC50Q8IVM0 306 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 TACO1Q9BSH4 297 aaKnown RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 MYH10P35580 1976 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 PHLPP1O60346 1717 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 PHF20L1A8MW92 1017 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 SLC1A4P43007 532 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 CNBD1Q8NA66 436 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 SNX29Q8TEQ0 813 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 RSRC1Q96IZ7 334 aaKnown RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 NOVA2Q9UNW9 492 aaKnown RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 BICDL2A1A5D9 508 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 LRRC53A6NM62 1247 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 DNM1LO00429 736 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 SV2BQ7L1I2 683 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 FMNL3Q8IVF7 1028 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 MTMR8Q96EF0 704 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 DHTKD1Q96HY7 919 aaPredicted RBP21.53■■□□□ 1.04
TRIM58-201ENST00000366481 TLR10Q9BXR5 811 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 TTYH3Q9C0H2 523 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 BLOC1S4Q9NUP1 217 aa21.53■■□□□ 1.04
TRIM58-201ENST00000366481 FAM196BA6NMK8 535 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 GKAP1Q5VSY0 366 aaPredicted RBP21.52■■□□□ 1.04
TRIM58-201ENST00000366481 KRT25Q7Z3Z0 450 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 DDX42Q86XP3 938 aaKnown RBP eCLIP21.52■■□□□ 1.04
TRIM58-201ENST00000366481 THOC1Q96FV9 657 aaKnown RBP21.52■■□□□ 1.04
TRIM58-201ENST00000366481 FGFBP2Q9BYJ0 223 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 CD209Q9NNX6 404 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 SALL4Q9UJQ4 1053 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 THRAP3Q9Y2W1 955 aaKnown RBP21.52■■□□□ 1.04
TRIM58-201ENST00000366481 PALMO75781 387 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 GCKP35557 465 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 ECM1Q16610 540 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 ZNF804AQ7Z570 1209 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 SEC16BQ96JE7 1060 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 A0A1B0GUL6 1792 aa21.52■■□□□ 1.04
TRIM58-201ENST00000366481 NPHP3-ACAD11A0A0J9YXS1 232 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 MPHOSPH10O00566 681 aaKnown RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 QPCTQ16769 361 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 TAL1P17542 331 aaPredicted RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 CALRP27797 417 aaKnown RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 GNA11P29992 359 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 SPRED3Q2MJR0 410 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 GLE1Q53GS7 698 aaKnown RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 DPP8Q6V1X1 898 aaPredicted RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 KCTD1Q719H9 257 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 RPGRQ92834 1020 aaKnown RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 PNMA5Q96PV4 448 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 PURBQ96QR8 312 aaKnown RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 OSBPL7Q9BZF2 842 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 NDST4Q9H3R1 872 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 SCNN1DP51172 638 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 GTF2IP78347 998 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 ITGB3BPQ13352 177 aaPredicted RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 SHROOM1Q2M3G4 852 aaPredicted RBP21.51■■□□□ 1.03
TRIM58-201ENST00000366481 HVCN1Q96D96 273 aa21.51■■□□□ 1.03
TRIM58-201ENST00000366481 SMIM23A6NLE4 172 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 C21orf2O43822 256 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 AKR1B1P15121 316 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 SLC8A1P32418 973 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 SNAP25P60880 206 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 TNNC1P63316 161 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 KRT71Q3SY84 523 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 MYO1EQ12965 1108 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 GRAPQ13588 217 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 ZNF662Q6ZS27 426 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 GRAPLQ8TC17 118 aaPredicted RBP21.5■■□□□ 1.03
TRIM58-201ENST00000366481 LARP4BQ92615 738 aaKnown RBP21.5■■□□□ 1.03
TRIM58-201ENST00000366481 DDX12PQ92771 950 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 TRIM31Q9BZY9 425 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 ATXN2Q99700 1313 aaKnown RBP21.5■■□□□ 1.03
TRIM58-201ENST00000366481 TMCO5BA8MYB1 307 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 KCNK3O14649 394 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 PRLRP16471 622 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 SCTRP47872 440 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 PLCB4Q15147 1175 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 WHAMMQ8TF30 809 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 RUBCNQ92622 972 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 PLAGL2Q9UPG8 496 aa21.5■■□□□ 1.03
TRIM58-201ENST00000366481 TULP1O00294 542 aaPredicted RBP21.49■■□□□ 1.03
TRIM58-201ENST00000366481 RAD51CO43502 376 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 ITIH3Q06033 890 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 LEMD3Q9Y2U8 911 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 TLDC2A0PJX2 215 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 CEP104O60308 925 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 ANKRD20A8PQ5CZ79 823 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 KLHDC7AQ5VTJ3 777 aa21.49■■□□□ 1.03
TRIM58-201ENST00000366481 COL14A1Q05707 1796 aaKnown RBP21.49■■□□□ 1.03
TRIM58-201ENST00000366481 MAGOHP61326 146 aaKnown RBP21.48■■□□□ 1.03
TRIM58-201ENST00000366481 GSTO1P78417 241 aa21.48■■□□□ 1.03
TRIM58-201ENST00000366481 VWA3BQ502W6 1294 aa21.48■■□□□ 1.03
TRIM58-201ENST00000366481 PPP4R3AQ6IN85 833 aa21.48■■□□□ 1.03
TRIM58-201ENST00000366481 CNNM4Q6P4Q7 775 aa21.48■■□□□ 1.03
TRIM58-201ENST00000366481 MAGOHBQ96A72 148 aaKnown RBP21.48■■□□□ 1.03
TRIM58-201ENST00000366481 C7orf25Q9BPX7 421 aa21.48■■□□□ 1.03
TRIM58-201ENST00000366481 AP1M1Q9BXS5 423 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms