RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Lrrc55Q3UY51 311 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Slc9a2Q3ZAS0 814 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ccdc157Q5SPX1 718 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Arhgap44Q5SSM3 814 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Psen2Q61144 448 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cnnm4Q69ZF7 771 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Krt74Q6IFZ9 495 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 PrimpolQ6P1E7 537 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Senp6Q6P7W0 1132 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 GopcQ8BH60 463 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Podxl2Q8CAE9 603 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Eif4a3Q91VC3 411 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 RpainQ9CWY9 219 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tmem192Q9CXT7 266 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Actn2Q9JI91 894 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Angptl3Q9R182 455 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Psma7Q9Z2U0 248 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Pcdh11xF6ZNL5 1338 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Prss51A0A286YDY8 319 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cyp2c69E9PXC3 491 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Pagr1bF6V0H0 108 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ighmbp2P40694 993 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cyp2c40P56657 491 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Kcnb1Q03717 857 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Spout1Q3UHX9 385 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Foxn3Q499D0 457 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ccna1Q61456 421 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Rufy1Q8BIJ7 712 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Dclk3Q8BWQ5 790 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Morc2bQ8C5W4 1022 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 SltmQ8CH25 1031 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Aipl1Q924K1 328 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Dhx58Q99J87 678 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Pagr1aQ99L02 253 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 March8Q9DBD2 286 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ipo7Q9EPL8 1038 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Nlrp5Q9R1M5 1163 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Orc1Q9Z1N2 840 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Gm28919A0A087WP35 240 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Parp2O88554 559 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Fam107bQ3TGF2 131 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Trappc10Q3TLI0 1259 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tmprss11aQ3UQ41 389 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Lrrc36Q3V0M2 755 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Phactr4Q501J7 694 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Igf2bp2Q5SF07 592 aaKnown RBP7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Shc3Q61120 474 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Kdm1aQ6ZQ88 853 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 HomezQ80W88 542 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ccdc122Q8BVN0 290 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Calcoco1Q8CGU1 691 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cacnb1Q8R3Z5 597 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 VillQ91YD6 859 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ubxn1Q922Y1 297 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Plagl2Q925T4 496 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Calr3Q9D9Q6 380 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Acot3Q9QYR7 432 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Stk11Q9WTK7 436 aa7.87□□□□□ -1.15
Clrn1-202ENSMUST00000055636 MycnP03966 462 aaKnown RBP7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cd44P15379 778 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Stat3P42227 770 aaKnown RBP7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Trim43aQ3TL54 445 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Gxylt1Q3UHH8 404 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 D630036H23RikQ3UQD6 204 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Lgr6Q3UVD5 967 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Jade2Q6ZQF7 829 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 3830417A13RikQ8BQJ2 303 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Scfd1Q8BRF7 639 aaKnown RBP7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 MslnlQ8C160 685 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cdk17Q8K0D0 523 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Dnajc28Q8VCE1 385 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cabp7Q91ZM8 215 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tor1aip1Q921T2 595 aaKnown RBP7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Hdac9Q99N13 588 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Q9CYI0 393 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 LrmdaQ9D9B4 229 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 PigoQ9JJI6 1093 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Gkap1Q9JMB0 366 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 GgcxQ9QYC7 757 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Plcb1Q9Z1B3 1216 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Flt1P35969 1333 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Actn4P57780 912 aaKnown RBP7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Pcif1P59114 706 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Npr3P70180 536 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Ptger2Q62053 362 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 CbarpQ66L44 698 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Maip1Q8BHE8 291 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Hirip3Q8BLH7 601 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Spata2Q8K004 515 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Slc5a5Q99PN0 618 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Azi2Q9QYP6 405 aa7.86□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Dnai2A2AC93 623 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Hnrnph3D3Z3N4 346 aaKnown RBP7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Nr1i2O54915 431 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Tcp1P11983 556 aaKnown RBP7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 OatP29758 439 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Cap1P40124 474 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Hdhd2Q3UGR5 259 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Rgl1Q60695 768 aa7.85□□□□□ -1.15
Clrn1-202ENSMUST00000055636 Stxbp2Q64324 593 aa7.85□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms