RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C VTA1Q06263 330 aa1.34□□□□□ -2.19
NIP100YPL174C NFT1P0CE68 1218 aa1.34□□□□□ -2.2
NIP100YPL174C BEM1P29366 551 aa1.34□□□□□ -2.2
NIP100YPL174C ATP3P38077 311 aaKnown RBP1.34□□□□□ -2.2
NIP100YPL174C PCF11P39081 626 aaPredicted RBP1.34□□□□□ -2.2
NIP100YPL174C UPF3P48412 387 aaKnown RBP1.34□□□□□ -2.2
NIP100YPL174C RHO5P53879 331 aaKnown RBP1.34□□□□□ -2.2
NIP100YPL174C HXT11P54862 567 aa1.34□□□□□ -2.2
NIP100YPL174C SLG1P54867 378 aa1.34□□□□□ -2.2
NIP100YPL174C OAZ1Q02803 292 aa1.34□□□□□ -2.2
NIP100YPL174C VHS1Q03785 461 aa1.34□□□□□ -2.2
NIP100YPL174C RED1P14291 827 aa1.33□□□□□ -2.2
NIP100YPL174C AIM10P39965 576 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C BIR1P47134 954 aa1.33□□□□□ -2.2
NIP100YPL174C MKC7P53379 596 aa1.33□□□□□ -2.2
NIP100YPL174C MRPL19P53875 158 aa1.33□□□□□ -2.2
NIP100YPL174C RNY1Q02933 434 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C CUE5Q08412 411 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C HTZ1Q12692 134 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C SOD1P00445 154 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C INH1P01097 85 aa1.33□□□□□ -2.2
NIP100YPL174C MET17P06106 444 aa1.33□□□□□ -2.2
NIP100YPL174C COX14P39103 70 aa1.33□□□□□ -2.2
NIP100YPL174C MET18P40469 1032 aa1.33□□□□□ -2.2
NIP100YPL174C MAM33P40513 266 aa1.33□□□□□ -2.2
NIP100YPL174C MDE1P47095 244 aa1.33□□□□□ -2.2
NIP100YPL174C YNR048WP53740 393 aa1.33□□□□□ -2.2
NIP100YPL174C TSR2Q06672 205 aaKnown RBP1.33□□□□□ -2.2
NIP100YPL174C IZH2Q12442 317 aa1.33□□□□□ -2.2
NIP100YPL174C YRF1-4O13559 1382 aa1.32□□□□□ -2.2
NIP100YPL174C RPS8AP0CX39 200 aaKnown RBP1.32□□□□□ -2.2
NIP100YPL174C RPS8BP0CX40 200 aaKnown RBP1.32□□□□□ -2.2
NIP100YPL174C RHB1P25378 209 aa1.32□□□□□ -2.2
NIP100YPL174C HAC1P41546 238 aa1.32□□□□□ -2.2
NIP100YPL174C RQC1Q05468 723 aaKnown RBP1.32□□□□□ -2.2
NIP100YPL174C PRP21P32524 280 aaPredicted RBP1.32□□□□□ -2.2
NIP100YPL174C SPR1P32603 445 aa1.32□□□□□ -2.2
NIP100YPL174C MRP21P38175 177 aa1.32□□□□□ -2.2
NIP100YPL174C RRP46P53256 223 aaPredicted RBP1.32□□□□□ -2.2
NIP100YPL174C TFB1P32776 642 aa1.31□□□□□ -2.2
NIP100YPL174C CHK1P38147 527 aa1.31□□□□□ -2.2
NIP100YPL174C RTC2P38279 296 aa1.31□□□□□ -2.2
NIP100YPL174C TIM17P39515 158 aa1.31□□□□□ -2.2
NIP100YPL174C SAS2P40963 338 aa1.31□□□□□ -2.2
NIP100YPL174C SSU1P41930 458 aa1.31□□□□□ -2.2
NIP100YPL174C DLD2P46681 530 aaKnown RBP1.31□□□□□ -2.2
NIP100YPL174C YPL107WQ02873 248 aa1.31□□□□□ -2.2
NIP100YPL174C ECM11Q04110 302 aa1.31□□□□□ -2.2
NIP100YPL174C YDL121CQ07541 149 aa1.31□□□□□ -2.2
NIP100YPL174C SMF3Q12078 473 aaPredicted RBP1.31□□□□□ -2.2
NIP100YPL174C VAM3Q12241 283 aa1.31□□□□□ -2.2
NIP100YPL174C ORT1Q12375 292 aa1.31□□□□□ -2.2
NIP100YPL174C EAF3Q12432 401 aa1.31□□□□□ -2.2
NIP100YPL174C CKA1P15790 372 aa1.31□□□□□ -2.2
NIP100YPL174C HSP26P15992 214 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
NIP100YPL174C CLC1P17891 233 aa1.31□□□□□ -2.2
NIP100YPL174C AAT2P23542 418 aaKnown RBP1.31□□□□□ -2.2
NIP100YPL174C HXT3P32466 567 aaKnown RBP1.31□□□□□ -2.2
NIP100YPL174C NUP2P32499 720 aa1.31□□□□□ -2.2
NIP100YPL174C CSE2P33308 149 aa1.31□□□□□ -2.2
NIP100YPL174C SMF1P38925 575 aa1.31□□□□□ -2.2
NIP100YPL174C ARE2P53629 642 aaKnown RBP1.31□□□□□ -2.2
NIP100YPL174C YMR010WQ03687 405 aa1.31□□□□□ -2.2
NIP100YPL174C MED1Q12321 566 aa1.31□□□□□ -2.2
NIP100YPL174C PRR1P28708 518 aa1.3□□□□□ -2.2
NIP100YPL174C MIG3P39943 394 aa1.3□□□□□ -2.2
NIP100YPL174C UTP18P40362 594 aaPredicted RBP1.3□□□□□ -2.2
NIP100YPL174C GAB1P41733 394 aa1.3□□□□□ -2.2
NIP100YPL174C SFH5P47008 294 aa1.3□□□□□ -2.2
NIP100YPL174C MTM1P53320 366 aa1.3□□□□□ -2.2
NIP100YPL174C KTR5P53966 522 aaPredicted RBP1.3□□□□□ -2.2
NIP100YPL174C YPQ1Q12010 308 aa1.3□□□□□ -2.2
NIP100YPL174C FUR1P18562 216 aaKnown RBP1.3□□□□□ -2.2
NIP100YPL174C BRF1P29056 596 aa1.3□□□□□ -2.2
NIP100YPL174C SAS3P34218 831 aa1.3□□□□□ -2.2
NIP100YPL174C SOR1P35497 357 aaKnown RBP1.3□□□□□ -2.2
NIP100YPL174C MRPS9P38120 278 aa1.3□□□□□ -2.2
NIP100YPL174C CCT2P39076 527 aaKnown RBP1.3□□□□□ -2.2
NIP100YPL174C OXA1P39952 402 aa1.3□□□□□ -2.2
NIP100YPL174C YNL208WP40159 199 aaKnown RBP1.3□□□□□ -2.2
NIP100YPL174C YJR011CP47086 261 aaPredicted RBP1.3□□□□□ -2.2
NIP100YPL174C YJR085CP47131 105 aaKnown RBP1.3□□□□□ -2.2
NIP100YPL174C COG4Q06096 861 aa1.3□□□□□ -2.2
NIP100YPL174C JID1Q12350 301 aa1.3□□□□□ -2.2
NIP100YPL174C URA4P20051 364 aa1.29□□□□□ -2.2
NIP100YPL174C COX13P32799 129 aa1.29□□□□□ -2.2
NIP100YPL174C SEC66P33754 206 aa1.29□□□□□ -2.2
NIP100YPL174C JNM1P36224 373 aa1.29□□□□□ -2.2
NIP100YPL174C RRN10P38204 145 aa1.29□□□□□ -2.2
NIP100YPL174C YMR147WP40218 223 aaKnown RBP1.29□□□□□ -2.2
NIP100YPL174C CRH1P53301 507 aa1.29□□□□□ -2.2
NIP100YPL174C KTR6P54070 446 aa1.29□□□□□ -2.2
NIP100YPL174C CCE1Q03702 353 aa1.29□□□□□ -2.2
NIP100YPL174C BCH1Q05029 724 aa1.29□□□□□ -2.2
NIP100YPL174C SOR2Q07786 357 aa1.29□□□□□ -2.2
NIP100YPL174C AHC1Q12433 566 aa1.29□□□□□ -2.2
NIP100YPL174C FOL3Q12676 427 aaPredicted RBP1.29□□□□□ -2.2
NIP100YPL174C CYC3P06182 269 aa1.29□□□□□ -2.2
NIP100YPL174C RIP1P08067 215 aa1.29□□□□□ -2.2
NIP100YPL174C HIR2P32480 875 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms