RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C RAX1Q08760 435 aa6.79□□□□□ -1.32
UME1YPL139C GLO4Q12320 285 aa6.79□□□□□ -1.32
UME1YPL139C YVC1Q12324 675 aa6.79□□□□□ -1.32
UME1YPL139C Q0010Q9ZZX9 128 aa6.79□□□□□ -1.32
UME1YPL139C CBP2P03874 630 aaPredicted RBP6.78□□□□□ -1.32
UME1YPL139C HOM3P10869 527 aa6.78□□□□□ -1.32
UME1YPL139C GCD2P12754 651 aaPredicted RBP6.78□□□□□ -1.32
UME1YPL139C PUP1P25043 261 aa6.78□□□□□ -1.32
UME1YPL139C NAM9P27929 486 aa6.78□□□□□ -1.32
UME1YPL139C ATO2P32907 282 aa6.78□□□□□ -1.32
UME1YPL139C CAF4P36130 643 aa6.78□□□□□ -1.32
UME1YPL139C YCR087C-AP37263 153 aa6.78□□□□□ -1.32
UME1YPL139C HSM3P38348 480 aa6.78□□□□□ -1.32
UME1YPL139C PHB1P40961 287 aa6.78□□□□□ -1.32
UME1YPL139C NAS6P50086 228 aa6.78□□□□□ -1.32
UME1YPL139C CDH1P53197 566 aa6.78□□□□□ -1.32
UME1YPL139C YNL010WP53981 241 aaKnown RBP6.78□□□□□ -1.32
UME1YPL139C NBA1Q08229 501 aaKnown RBP6.78□□□□□ -1.32
UME1YPL139C TMS1Q12116 473 aa6.78□□□□□ -1.32
UME1YPL139C PNS1Q12412 539 aa6.78□□□□□ -1.32
UME1YPL139C CDC9P04819 755 aa6.77□□□□□ -1.33
UME1YPL139C ARG81P05085 880 aa6.77□□□□□ -1.33
UME1YPL139C ARD1P07347 238 aaPredicted RBP6.77□□□□□ -1.33
UME1YPL139C PRI2P20457 528 aa6.77□□□□□ -1.33
UME1YPL139C ADH7P25377 361 aa6.77□□□□□ -1.33
UME1YPL139C SEC17P32602 292 aa6.77□□□□□ -1.33
UME1YPL139C HES1P35843 434 aa6.77□□□□□ -1.33
UME1YPL139C MNN2P38069 597 aa6.77□□□□□ -1.33
UME1YPL139C COS111P38308 924 aa6.77□□□□□ -1.33
UME1YPL139C BZZ1P38822 633 aa6.77□□□□□ -1.33
UME1YPL139C PRP39P39682 629 aaKnown RBP6.77□□□□□ -1.33
UME1YPL139C PTI1P39927 425 aaPredicted RBP6.77□□□□□ -1.33
UME1YPL139C SNO3P43544 222 aa6.77□□□□□ -1.33
UME1YPL139C TIM54P47045 478 aa6.77□□□□□ -1.33
UME1YPL139C OCA1P50946 238 aaPredicted RBP6.77□□□□□ -1.33
UME1YPL139C YLL054CQ12244 843 aa6.77□□□□□ -1.33
UME1YPL139C YBL113CQ7M4S9 792 aa6.77□□□□□ -1.33
UME1YPL139C IPP1P00817 287 aaKnown RBP6.76□□□□□ -1.33
UME1YPL139C MSS116P15424 664 aaKnown RBP6.76□□□□□ -1.33
UME1YPL139C NPP1P25353 742 aa6.76□□□□□ -1.33
UME1YPL139C GFD2P25370 566 aaKnown RBP6.76□□□□□ -1.33
UME1YPL139C ARE1P25628 610 aa6.76□□□□□ -1.33
UME1YPL139C PMT2P31382 759 aa6.76□□□□□ -1.33
UME1YPL139C LOS1P33418 1100 aaPredicted RBP6.76□□□□□ -1.33
UME1YPL139C STP2P38704 541 aa6.76□□□□□ -1.33
UME1YPL139C PZF1P39933 429 aa6.76□□□□□ -1.33
UME1YPL139C YEN1P40028 759 aa6.76□□□□□ -1.33
UME1YPL139C ICE2P40499 491 aa6.76□□□□□ -1.33
UME1YPL139C CUS2P53830 285 aaPredicted RBP6.76□□□□□ -1.33
UME1YPL139C UBP2Q01476 1272 aa6.76□□□□□ -1.33
UME1YPL139C YET2Q04210 160 aa6.76□□□□□ -1.33
UME1YPL139C YPR174CQ06616 221 aaPredicted RBP6.76□□□□□ -1.33
UME1YPL139C YOL024WQ08172 172 aa6.76□□□□□ -1.33
UME1YPL139C AKR2Q12013 749 aa6.76□□□□□ -1.33
UME1YPL139C MMP1Q12372 583 aa6.76□□□□□ -1.33
UME1YPL139C YPR096CO13587 100 aa6.75□□□□□ -1.33
UME1YPL139C YPT1P01123 206 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C SIP2P34164 415 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C OAR1P35731 278 aa6.75□□□□□ -1.33
UME1YPL139C DOA1P36037 715 aa6.75□□□□□ -1.33
UME1YPL139C GIP2P40036 548 aa6.75□□□□□ -1.33
UME1YPL139C SER3P40054 469 aa6.75□□□□□ -1.33
UME1YPL139C PSA1P41940 361 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C SPT20P50875 604 aa6.75□□□□□ -1.33
UME1YPL139C MRM2P53123 320 aa6.75□□□□□ -1.33
UME1YPL139C SVL3Q03088 825 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C ECM11Q04110 302 aa6.75□□□□□ -1.33
UME1YPL139C TPO4Q12256 659 aa6.75□□□□□ -1.33
UME1YPL139C RIB2Q12362 591 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C NOP58Q12499 511 aaKnown RBP6.75□□□□□ -1.33
UME1YPL139C CDC26P14724 124 aa6.74□□□□□ -1.33
UME1YPL139C LTV1P34078 463 aa6.74□□□□□ -1.33
UME1YPL139C YBR139WP38109 508 aa6.74□□□□□ -1.33
UME1YPL139C AIM2P39721 246 aa6.74□□□□□ -1.33
UME1YPL139C CUP9P41817 306 aa6.74□□□□□ -1.33
UME1YPL139C UBX6P47049 396 aa6.74□□□□□ -1.33
UME1YPL139C TAF6P53040 516 aa6.74□□□□□ -1.33
UME1YPL139C IDP3P53982 420 aaKnown RBP6.74□□□□□ -1.33
UME1YPL139C RHO4Q00246 291 aa6.74□□□□□ -1.33
UME1YPL139C SNP1Q00916 300 aaPredicted RBP6.74□□□□□ -1.33
UME1YPL139C ISR1Q06098 443 aaKnown RBP6.74□□□□□ -1.33
UME1YPL139C CDA2Q06703 312 aa6.74□□□□□ -1.33
UME1YPL139C PUN1Q06991 263 aa6.74□□□□□ -1.33
UME1YPL139C YPL272CQ08984 517 aa6.74□□□□□ -1.33
UME1YPL139C YPT6Q99260 215 aa6.74□□□□□ -1.33
UME1YPL139C CAR1P00812 333 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C GLK1P17709 500 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C SEC62P21825 274 aa6.73□□□□□ -1.33
UME1YPL139C RPC19P28000 142 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C YJU2P28320 278 aaPredicted RBP6.73□□□□□ -1.33
UME1YPL139C AAR2P32357 355 aaPredicted RBP6.73□□□□□ -1.33
UME1YPL139C CAT2P32796 670 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C ORC2P32833 620 aa6.73□□□□□ -1.33
UME1YPL139C VPS21P36017 210 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C KAE1P36132 386 aa6.73□□□□□ -1.33
UME1YPL139C ERP5P38819 212 aa6.73□□□□□ -1.33
UME1YPL139C GTO1P48239 356 aa6.73□□□□□ -1.33
UME1YPL139C RNR4P49723 345 aaKnown RBP6.73□□□□□ -1.33
UME1YPL139C HOS2P53096 452 aaPredicted RBP6.73□□□□□ -1.33
UME1YPL139C RNT1Q02555 471 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms