RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	OTU2	P38747	307 aa	Known RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	RRF1	P38771	230 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	AIM18	P38884	321 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RTT105	P40063	208 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RRT5	P43607	289 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	BUD13	P46947	266 aa	Predicted RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	TIM13	P53299	105 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	ARE2	P53629	642 aa	Known RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	HST1	P53685	503 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RHO3	Q00245	231 aa	Known RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	UME1	Q03010	460 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RNH1	Q04740	348 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RCO1	Q04779	684 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	RRP45	Q05636	305 aa	Known RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	TSR2	Q06672	205 aa	Known RBP	3.99	□□□□□ -1.77
SNF8	YPL002C	BUD7	Q08754	746 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	DIN7	Q12086	430 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	IZH4	Q99393	312 aa		3.99	□□□□□ -1.77
SNF8	YPL002C	URA4	P20051	364 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	ATP12	P22135	325 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	YCR006C	P25350	157 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	POL4	P25615	582 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	AEP1	P32493	518 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	SKN1	P33336	771 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	SEF1	P34228	1148 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	SMC2	P38989	1170 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	LSM5	P40089	93 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	RGI2	P40188	164 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	ATM1	P40416	690 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	GPP1	P41277	250 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	ELP2	P42935	788 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	YJL107C	P42947	387 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	TRM9	P49957	279 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	BTN2	P53286	410 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	RAD33	Q04231	177 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	YDR222W	Q04925	415 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	DBP9	Q06218	594 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	NGL1	Q08213	363 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	OCA6	Q12454	224 aa		3.98	□□□□□ -1.77
SNF8	YPL002C	TMA7	Q3E764	64 aa	Known RBP	3.98	□□□□□ -1.77
SNF8	YPL002C	MRPL25	P23369	157 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	YSP3	P25036	478 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	MEI4	P29467	408 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	SSH4	P32343	579 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	NIP1	P32497	812 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	PRP18	P33411	251 aa	Predicted RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	MRPL15	P36523	253 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	MRPL37	P36532	105 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	TRM7	P38238	310 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	DBP8	P38719	431 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	YHR182W	P38870	785 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	VPS41	P38959	992 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	ARB1	P40024	610 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	SEC24	P40482	926 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	HYR1	P40581	163 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	TES1	P41903	349 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	ATP22	P50273	684 aa	Predicted RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	STR3	P53101	465 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	PEF1	P53238	335 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	PRO2	P54885	456 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	RLI1	Q03195	608 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	YET2	Q04210	160 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	IVY1	Q04934	453 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	SMF3	Q12078	473 aa	Predicted RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	LEU9	Q12166	604 aa	Known RBP	3.97	□□□□□ -1.77
SNF8	YPL002C	LAG2	Q92325	660 aa		3.97	□□□□□ -1.77
SNF8	YPL002C	CYR1	P08678	2026 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	YPT1	P01123	206 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	RPB2	P08518	1224 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	MER1	P16523	270 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	RPB4	P20433	221 aa	Predicted RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	DAL3	P32459	195 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	HXT3	P32466	567 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	CDC5	P32562	705 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	FTH1	P38310	465 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	YEL073C	P39974	107 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	GIM4	P40005	111 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	IRC7	P43623	340 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	RAD17	P48581	401 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	COG1	P53079	417 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	LSC1	P53598	329 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	ZRG17	P53735	605 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	EFM6	P53970	246 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	UBX4	P54730	416 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	ATG38	Q05789	226 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	YLR287C	Q05881	355 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	VTA1	Q06263	330 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	ARV1	Q06541	321 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	NEW1	Q08972	1196 aa	Known RBP	3.96	□□□□□ -1.78
SNF8	YPL002C	ATG9	Q12142	997 aa		3.96	□□□□□ -1.78
SNF8	YPL002C	HNM1	P19807	563 aa		3.95	□□□□□ -1.78
SNF8	YPL002C	CLN1	P20437	546 aa		3.95	□□□□□ -1.78
SNF8	YPL002C	YCP4	P25349	247 aa	Known RBP	3.95	□□□□□ -1.78
SNF8	YPL002C	GFD2	P25370	566 aa	Known RBP	3.95	□□□□□ -1.78
SNF8	YPL002C	CPR3	P25719	182 aa		3.95	□□□□□ -1.78
SNF8	YPL002C	DAL80	P26343	269 aa		3.95	□□□□□ -1.78
SNF8	YPL002C	HEM12	P32347	362 aa	Predicted RBP	3.95	□□□□□ -1.78
SNF8	YPL002C	RAD5	P32849	1169 aa	Predicted RBP	3.95	□□□□□ -1.78
SNF8	YPL002C	STB6	P36085	766 aa		3.95	□□□□□ -1.78
SNF8	YPL002C	YHR210C	P38893	341 aa		3.95	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms