RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	MYO5	Q04439	1219 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	CSM3	Q04659	317 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SNO4	Q04902	237 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SKG3	Q06315	1026 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YOL075C	Q08234	1294 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YOR365C	Q08844	703 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	HSP33	Q08914	237 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	HSP32	Q08992	237 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YTM1	Q12024	460 aa	Predicted RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	SVS1	Q12254	260 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AFI1	Q99222	893 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	CHO2	P05374	869 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	RAD1	P06777	1100 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	CDC33	P07260	213 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	GCR1	P07261	785 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ASP3-2	P0CX77	362 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ASP3-3	P0CX78	362 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ASP3-4	P0CX79	362 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ASP3-1	P0CZ17	362 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PEP5	P12868	1029 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ZRC1	P20107	442 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AIM17	P23180	465 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	CPR2	P23285	205 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PRE7	P23724	241 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	RBK1	P25332	333 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PMT2	P31382	759 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	UGA4	P32837	571 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SIP2	P34164	415 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	PTC1	P35182	281 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YKL077W	P36081	392 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ICS2	P38284	255 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AIM18	P38884	321 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	PCF11	P39081	626 aa	Predicted RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	GPB2	P39717	880 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YER130C	P39959	443 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	RMD6	P39975	231 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	FIR1	P40020	876 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YMR147W	P40218	223 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	RFC4	P40339	323 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	SEC24	P40482	926 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	OPT1	P40897	799 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	CIN1	P40987	1014 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AIM22	P47051	409 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YJR115W	P47152	169 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	RFX1	P48743	811 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ZPR1	P53303	486 aa	Known RBP	3.2	□□□□□ -1.9
SQS1	YNL224C	YNR066C	P53752	436 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YNL184C	P53876	108 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YNL115C	P53925	644 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	SKO1	Q02100	647 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	ADI1	Q03677	179 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YDR132C	Q03900	495 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YDR387C	Q04162	555 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	CTI6	Q08923	506 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YOR223W	Q12015	292 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	AIM41	Q12032	185 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	OCA6	Q12454	224 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	YBR298C-A	Q8TGK4	73 aa		3.2	□□□□□ -1.9
SQS1	YNL224C	IRC20	Q06554	1556 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RHO1	P06780	209 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	ILV2	P07342	687 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	MRP1	P10662	321 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	PET54	P10834	293 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	FRS2	P15625	503 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	ERD2	P18414	219 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	UBC1	P21734	215 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SQS1	YNL224C	BEM1	P29366	551 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ISF1	P32488	338 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	PRP21	P32524	280 aa	Predicted RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	MKS1	P34072	584 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	SPC34	P36131	295 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RIB1	P38066	345 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YBR220C	P38318	560 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YHL008C	P38750	627 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	GIC1	P38785	314 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ATG7	P38862	630 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	SMF1	P38925	575 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	CKB2	P38930	258 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ACO2	P39533	789 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	NPT1	P39683	429 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	NPP2	P39997	493 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	GZF3	P42944	551 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	SNG1	P46950	547 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ERP6	P53198	216 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RPA49	Q01080	415 aa	Predicted RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	YMR027W	Q04371	470 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	ATG33	Q06485	197 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	TUM1	Q08686	304 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	DCS2	Q12123	353 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	BAG7	Q12128	409 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	LEU2	P04173	364 aa	Predicted RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	CDC7	P06243	507 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	INO1	P11986	533 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RNR3	P21672	869 aa	Known RBP	3.19	□□□□□ -1.9
SQS1	YNL224C	ATP12	P22135	325 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RPB10	P22139	70 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	AGP1	P25376	633 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	YUR1	P26725	428 aa		3.19	□□□□□ -1.9
SQS1	YNL224C	RGT1	P32862	1170 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms