RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEP5	YMR231W	KRE6	P32486	720 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	PDR3	P33200	976 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	TKL2	P33315	681 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	ASK1	P35734	292 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YPT52	P36018	234 aa	Known RBP	4.17	□□□□□ -1.74
PEP5	YMR231W	YCR087C-A	P37263	153 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	HMT1	P38074	348 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YHR020W	P38708	688 aa	Known RBP	4.17	□□□□□ -1.74
PEP5	YMR231W	BIG1	P38813	335 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	SWM2	P40342	146 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	MAF1	P41910	395 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YNR063W	P53749	607 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	NUP49	Q02199	472 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	PMT7	Q06644	662 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	PGC1	Q08959	321 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YDL109C	Q12103	647 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	ATP14	Q12349	124 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	SNU23	Q12368	194 aa	Predicted RBP	4.17	□□□□□ -1.74
PEP5	YMR231W	SKM1	Q12469	655 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YCL012C	Q8J0M4	134 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	PUT2	P07275	575 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	SPS2	P08459	502 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YAP1	P19880	650 aa	Known RBP	4.17	□□□□□ -1.74
PEP5	YMR231W	OAC1	P32332	324 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	APL3	P38065	1025 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	ECM31	P38122	312 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	SNM1	P40993	198 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YMD8	Q03697	442 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YMR130W	Q04223	302 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	MRX10	Q05648	414 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YPR127W	Q06494	345 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	OPT2	Q06593	877 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	YLL007C	Q07799	665 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	MSC6	Q08818	692 aa	Known RBP	4.17	□□□□□ -1.74
PEP5	YMR231W	YPL199C	Q08954	240 aa		4.17	□□□□□ -1.74
PEP5	YMR231W	POX1	P13711	748 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	CMP2	P14747	604 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	GUK1	P15454	187 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	PRI2	P20457	528 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	YIH1	P25637	258 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	TIP20	P33891	701 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	MAP2	P38174	421 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	NVJ1	P38881	321 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	GTS1	P40956	396 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	IME4	P41833	600 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	YJL043W	P47053	257 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	NCS6	P53088	359 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	MON1	P53129	644 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	NAM8	Q00539	523 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	SPC19	Q03954	165 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	CTK1	Q03957	528 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	PPN1	Q04119	674 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	DCS1	Q06151	350 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	VPS74	Q06385	345 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	TPO3	Q06451	622 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	GSH2	Q08220	491 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	FEX1	Q08913	375 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	HUA2	Q12134	243 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	UBX3	Q12229	455 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	STE3	P06783	470 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	UNG1	P12887	359 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	HOM2	P13663	365 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	GRR1	P24814	1151 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	PGS1	P25578	521 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PEP5	YMR231W	CDC5	P32562	705 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	RTG2	P32608	588 aa	Known RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	DHR2	P36009	735 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	MRPL7	P36519	292 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	YIL024C	P40543	189 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	OPT1	P40897	799 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	AIM22	P47051	409 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	JHD2	P47156	728 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	YMR034C	Q05131	434 aa	Predicted RBP	4.16	□□□□□ -1.74
PEP5	YMR231W	YLR012C	Q07927	99 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	MRX4	Q12467	430 aa		4.16	□□□□□ -1.74
PEP5	YMR231W	CAN1	P04817	590 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	SEC12	P11655	471 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	HOP1	P20050	605 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	RSA4	P25382	515 aa	Known RBP	4.15	□□□□□ -1.74
PEP5	YMR231W	YPC1	P38298	316 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	UBX7	P38349	436 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	MLH1	P38920	769 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	RRG9	P40156	214 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	ERG10	P41338	398 aa	Known RBP	4.15	□□□□□ -1.74
PEP5	YMR231W	RPS7B	P48164	190 aa	Known RBP	4.15	□□□□□ -1.74
PEP5	YMR231W	DUS1	P53759	423 aa	Known RBP	4.15	□□□□□ -1.74
PEP5	YMR231W	HXT15	P54854	567 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	FRE3	Q08905	711 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	NMD4	Q12129	218 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	TSC13	Q99190	310 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	YOR338W	Q99326	363 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	UBR1	P19812	1950 aa		4.15	□□□□□ -1.74
PEP5	YMR231W	SLH1	P53327	1967 aa	Known RBP	4.15	□□□□□ -1.74
PEP5	YMR231W	SWI5	P08153	709 aa		4.15	□□□□□ -1.75
PEP5	YMR231W	APE1	P14904	514 aa		4.15	□□□□□ -1.75
PEP5	YMR231W	FPS1	P23900	669 aa		4.15	□□□□□ -1.75
PEP5	YMR231W	SEC61	P32915	480 aa		4.15	□□□□□ -1.75
PEP5	YMR231W	MSC7	P38694	644 aa		4.15	□□□□□ -1.75
PEP5	YMR231W	DED81	P38707	554 aa	Known RBP	4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 73.3 ms