RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W GLN4P13188 809 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W TFS1P14306 219 aa1.75□□□□□ -2.13
RTP1YMR185W MET16P18408 261 aaPredicted RBP1.75□□□□□ -2.13
RTP1YMR185W VPS33P20795 691 aa1.75□□□□□ -2.13
RTP1YMR185W DBF2P22204 572 aa1.75□□□□□ -2.13
RTP1YMR185W OCA4P25366 362 aa1.75□□□□□ -2.13
RTP1YMR185W UBC8P28263 218 aa1.75□□□□□ -2.13
RTP1YMR185W RPS0AP32905 252 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W SKT5P34226 696 aa1.75□□□□□ -2.13
RTP1YMR185W SHE3P38272 425 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W IFA38P38286 347 aa1.75□□□□□ -2.13
RTP1YMR185W TSL1P38427 1098 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W YHL041WP38730 149 aa1.75□□□□□ -2.13
RTP1YMR185W EXO1P39875 702 aa1.75□□□□□ -2.13
RTP1YMR185W YER034WP40022 185 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W SPO73P40031 143 aa1.75□□□□□ -2.13
RTP1YMR185W ATM1P40416 690 aa1.75□□□□□ -2.13
RTP1YMR185W PRM2P40534 656 aa1.75□□□□□ -2.13
RTP1YMR185W IST3P40565 148 aaPredicted RBP1.75□□□□□ -2.13
RTP1YMR185W ALR2P43553 858 aa1.75□□□□□ -2.13
RTP1YMR185W YFL040WP43562 540 aa1.75□□□□□ -2.13
RTP1YMR185W GYP8P43570 497 aa1.75□□□□□ -2.13
RTP1YMR185W BUD13P46947 266 aaPredicted RBP1.75□□□□□ -2.13
RTP1YMR185W MNN5P46982 586 aa1.75□□□□□ -2.13
RTP1YMR185W STE24P47154 453 aa1.75□□□□□ -2.13
RTP1YMR185W YJR154WP47181 346 aa1.75□□□□□ -2.13
RTP1YMR185W UPF3P48412 387 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W TOM22P49334 152 aa1.75□□□□□ -2.13
RTP1YMR185W RPL4BP49626 362 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W KEL2P50090 882 aa1.75□□□□□ -2.13
RTP1YMR185W PSP2P50109 593 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W MRH4P53166 561 aa1.75□□□□□ -2.13
RTP1YMR185W MKC7P53379 596 aa1.75□□□□□ -2.13
RTP1YMR185W ARE2P53629 642 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W EFM6P53970 246 aa1.75□□□□□ -2.13
RTP1YMR185W KTR6P54070 446 aa1.75□□□□□ -2.13
RTP1YMR185W TRM44Q02648 567 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W MSC2Q03455 724 aa1.75□□□□□ -2.13
RTP1YMR185W YDR514CQ04408 483 aa1.75□□□□□ -2.13
RTP1YMR185W APC4Q04601 652 aa1.75□□□□□ -2.13
RTP1YMR185W RCO1Q04779 684 aa1.75□□□□□ -2.13
RTP1YMR185W ATG38Q05789 226 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W YLR345WQ06137 509 aa1.75□□□□□ -2.13
RTP1YMR185W PHO92Q06390 306 aa1.75□□□□□ -2.13
RTP1YMR185W TSR2Q06672 205 aaKnown RBP1.75□□□□□ -2.13
RTP1YMR185W RRT8Q08219 342 aa1.75□□□□□ -2.13
RTP1YMR185W YDR056CQ12025 205 aa1.75□□□□□ -2.13
RTP1YMR185W ATG29Q12092 213 aa1.75□□□□□ -2.13
RTP1YMR185W GTT2Q12390 233 aa1.75□□□□□ -2.13
RTP1YMR185W APM4Q99186 491 aa1.75□□□□□ -2.13
RTP1YMR185W YOR019WQ99248 730 aa1.75□□□□□ -2.13
RTP1YMR185W PPH22P23595 377 aa1.74□□□□□ -2.13
RTP1YMR185W RHB1P25378 209 aa1.74□□□□□ -2.13
RTP1YMR185W SYP1P25623 870 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W TAH1P25638 111 aaPredicted RBP1.74□□□□□ -2.13
RTP1YMR185W CAM1P29547 415 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W SYN8P31377 255 aa1.74□□□□□ -2.13
RTP1YMR185W HIR2P32480 875 aa1.74□□□□□ -2.13
RTP1YMR185W VMA8P32610 256 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W PTM1P32857 523 aa1.74□□□□□ -2.13
RTP1YMR185W HIS7P33734 552 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W ASK1P35734 292 aa1.74□□□□□ -2.13
RTP1YMR185W YBR056WP38081 501 aa1.74□□□□□ -2.13
RTP1YMR185W POA1P38218 177 aa1.74□□□□□ -2.13
RTP1YMR185W KSP1P38691 1029 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W SWD1P39706 426 aa1.74□□□□□ -2.13
RTP1YMR185W EDC3P39998 551 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W ZRG8P40021 1076 aa1.74□□□□□ -2.13
RTP1YMR185W HXT9P40885 567 aa1.74□□□□□ -2.13
RTP1YMR185W YJL218WP40892 196 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W SER2P42941 309 aa1.74□□□□□ -2.13
RTP1YMR185W YGR210CP42942 411 aa1.74□□□□□ -2.13
RTP1YMR185W ROK1P45818 564 aaPredicted RBP1.74□□□□□ -2.13
RTP1YMR185W MET12P46151 657 aa1.74□□□□□ -2.13
RTP1YMR185W RPS10BP46784 105 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W GUF1P46943 645 aa1.74□□□□□ -2.13
RTP1YMR185W ALB1P47019 175 aaPredicted RBP1.74□□□□□ -2.13
RTP1YMR185W EFM5P53200 248 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W NQM1P53228 333 aaPredicted RBP1.74□□□□□ -2.13
RTP1YMR185W YGR266WP53326 701 aa1.74□□□□□ -2.13
RTP1YMR185W MRPL50P53724 139 aa1.74□□□□□ -2.13
RTP1YMR185W ESF2P53743 316 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W COX20Q04935 205 aa1.74□□□□□ -2.13
RTP1YMR185W CDD1Q06549 142 aa1.74□□□□□ -2.13
RTP1YMR185W SWC7Q06707 132 aa1.74□□□□□ -2.13
RTP1YMR185W RPS10AQ08745 105 aaPredicted RBP1.74□□□□□ -2.13
RTP1YMR185W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RTP1YMR185W NUS1Q12063 375 aa1.74□□□□□ -2.13
RTP1YMR185W YLR049CQ12110 428 aa1.74□□□□□ -2.13
RTP1YMR185W NBP2Q12163 236 aa1.74□□□□□ -2.13
RTP1YMR185W ACF2Q12168 779 aa1.74□□□□□ -2.13
RTP1YMR185W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RTP1YMR185W LCB4Q12246 624 aa1.74□□□□□ -2.13
RTP1YMR185W SFG1Q12507 346 aa1.74□□□□□ -2.13
RTP1YMR185W ZPS1Q12512 249 aa1.74□□□□□ -2.13
RTP1YMR185W YHR213W-AQ8TGT4 77 aa1.74□□□□□ -2.13
RTP1YMR185W ARG3P05150 338 aa1.74□□□□□ -2.13
RTP1YMR185W ARG80P07249 177 aa1.74□□□□□ -2.13
RTP1YMR185W DBP2P24783 546 aaKnown RBP1.74□□□□□ -2.13
RTP1YMR185W RRP7P25368 297 aaPredicted RBP1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms