RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W JLP2P40206 208 aa2.25□□□□□ -2.05
DDR48YMR173W RNY1Q02933 434 aaKnown RBP2.25□□□□□ -2.05
DDR48YMR173W RIM20Q12033 661 aa2.25□□□□□ -2.05
DDR48YMR173W SNU66Q12420 587 aaPredicted RBP2.25□□□□□ -2.05
DDR48YMR173W FAB1P34756 2278 aa2.25□□□□□ -2.05
DDR48YMR173W YML133CQ03099 1374 aa2.24□□□□□ -2.05
DDR48YMR173W YLL067CQ07888 1374 aa2.24□□□□□ -2.05
DDR48YMR173W YLL066CQ99208 1374 aa2.24□□□□□ -2.05
DDR48YMR173W ARG3P05150 338 aa2.24□□□□□ -2.05
DDR48YMR173W SNT1P25357 1226 aa2.24□□□□□ -2.05
DDR48YMR173W GFD2P25370 566 aaKnown RBP2.24□□□□□ -2.05
DDR48YMR173W KRE2P27809 442 aa2.24□□□□□ -2.05
DDR48YMR173W HXT3P32466 567 aaKnown RBP2.24□□□□□ -2.05
DDR48YMR173W CSE2P33308 149 aa2.24□□□□□ -2.05
DDR48YMR173W MRPL10P36520 322 aa2.24□□□□□ -2.05
DDR48YMR173W VHC1P38329 1120 aa2.24□□□□□ -2.05
DDR48YMR173W ESL1P40456 1118 aa2.24□□□□□ -2.05
DDR48YMR173W MDE1P47095 244 aa2.24□□□□□ -2.05
DDR48YMR173W RHO5P53879 331 aaKnown RBP2.24□□□□□ -2.05
DDR48YMR173W RPT6Q01939 405 aaKnown RBP2.24□□□□□ -2.05
DDR48YMR173W TAF12Q03761 539 aa2.24□□□□□ -2.05
DDR48YMR173W VTA1Q06263 330 aa2.24□□□□□ -2.05
DDR48YMR173W RKM1Q08961 583 aaPredicted RBP2.24□□□□□ -2.05
DDR48YMR173W JID1Q12350 301 aa2.24□□□□□ -2.05
DDR48YMR173W ILV5P06168 395 aaKnown RBP2.23□□□□□ -2.05
DDR48YMR173W GPI10P30777 616 aa2.23□□□□□ -2.05
DDR48YMR173W OTU2P38747 307 aaKnown RBP2.23□□□□□ -2.05
DDR48YMR173W SMF1P38925 575 aa2.23□□□□□ -2.05
DDR48YMR173W ARF3P40994 183 aaRIP-Chip data2.23□□□□□ -2.05not detected
DDR48YMR173W AZR1P50080 613 aa2.23□□□□□ -2.05
DDR48YMR173W FMS1P50264 508 aa2.23□□□□□ -2.05
DDR48YMR173W YIF1P53845 314 aaKnown RBP2.23□□□□□ -2.05
DDR48YMR173W BET5Q03630 159 aa2.23□□□□□ -2.05
DDR48YMR173W BCH1Q05029 724 aa2.23□□□□□ -2.05
DDR48YMR173W MDM30Q05930 598 aa2.23□□□□□ -2.05
DDR48YMR173W NDE2Q07500 545 aa2.23□□□□□ -2.05
DDR48YMR173W REX4Q08237 289 aa2.23□□□□□ -2.05
DDR48YMR173W CLC1P17891 233 aa2.22□□□□□ -2.05
DDR48YMR173W RPB5P20434 215 aa2.22□□□□□ -2.05
DDR48YMR173W RAD57P25301 460 aa2.22□□□□□ -2.05
DDR48YMR173W YAL037WP39728 267 aa2.22□□□□□ -2.05
DDR48YMR173W DFG10P40526 253 aa2.22□□□□□ -2.05
DDR48YMR173W SFH5P47008 294 aa2.22□□□□□ -2.05
DDR48YMR173W HMS2P47175 358 aa2.22□□□□□ -2.05
DDR48YMR173W MTQ1P53944 314 aa2.22□□□□□ -2.05
DDR48YMR173W GPI15P53961 229 aa2.22□□□□□ -2.05
DDR48YMR173W TIM10P87108 93 aa2.22□□□□□ -2.05
DDR48YMR173W MED1Q12321 566 aa2.22□□□□□ -2.05
DDR48YMR173W HSP42Q12329 375 aa2.22□□□□□ -2.05
DDR48YMR173W RRI2Q12348 645 aa2.22□□□□□ -2.05
DDR48YMR173W IZH2Q12442 317 aa2.22□□□□□ -2.05
DDR48YMR173W PRB1P09232 635 aa2.21□□□□□ -2.06
DDR48YMR173W SMY1P32364 656 aaKnown RBP2.21□□□□□ -2.06
DDR48YMR173W MIG3P39943 394 aa2.21□□□□□ -2.06
DDR48YMR173W IRC6P43615 237 aa2.21□□□□□ -2.06
DDR48YMR173W DLD2P46681 530 aaKnown RBP2.21□□□□□ -2.06
DDR48YMR173W VHS1Q03785 461 aa2.21□□□□□ -2.06
DDR48YMR173W CMS1Q07897 291 aaKnown RBP2.21□□□□□ -2.06
DDR48YMR173W SRL2Q12020 392 aa2.21□□□□□ -2.06
DDR48YMR173W SPO12P17123 173 aa2.2□□□□□ -2.06
DDR48YMR173W PPH22P23595 377 aa2.2□□□□□ -2.06
DDR48YMR173W PRR1P28708 518 aa2.2□□□□□ -2.06
DDR48YMR173W HIR2P32480 875 aa2.2□□□□□ -2.06
DDR48YMR173W NIP1P32497 812 aaKnown RBP2.2□□□□□ -2.06
DDR48YMR173W RRP1P35178 278 aaPredicted RBP2.2□□□□□ -2.06
DDR48YMR173W SPT10P35208 640 aa2.2□□□□□ -2.06
DDR48YMR173W ARA1P38115 344 aa2.2□□□□□ -2.06
DDR48YMR173W YHR131CP38835 850 aa2.2□□□□□ -2.06
DDR48YMR173W SEO1P39709 593 aa2.2□□□□□ -2.06
DDR48YMR173W RPA49Q01080 415 aaPredicted RBP2.2□□□□□ -2.06
DDR48YMR173W YRM1Q12340 786 aa2.2□□□□□ -2.06
DDR48YMR173W SCEIP03882 235 aa2.19□□□□□ -2.06
DDR48YMR173W MRP7P12687 371 aa2.19□□□□□ -2.06
DDR48YMR173W AAT2P23542 418 aaKnown RBP2.19□□□□□ -2.06
DDR48YMR173W ROX1P25042 368 aa2.19□□□□□ -2.06
DDR48YMR173W RML2P32611 393 aa2.19□□□□□ -2.06
DDR48YMR173W APE3P37302 537 aaKnown RBP2.19□□□□□ -2.06
DDR48YMR173W SIM1P40472 476 aa2.19□□□□□ -2.06
DDR48YMR173W RAX1Q08760 435 aa2.19□□□□□ -2.06
DDR48YMR173W TPT1Q12272 230 aaKnown RBP2.19□□□□□ -2.06
DDR48YMR173W MSI1P13712 422 aa2.18□□□□□ -2.06
DDR48YMR173W CKA1P15790 372 aa2.18□□□□□ -2.06
DDR48YMR173W SPO7P18410 259 aa2.18□□□□□ -2.06
DDR48YMR173W MRPS9P38120 278 aa2.18□□□□□ -2.06
DDR48YMR173W RTC2P38279 296 aa2.18□□□□□ -2.06
DDR48YMR173W ALD5P40047 520 aaKnown RBP2.18□□□□□ -2.06
DDR48YMR173W RPS0BP46654 252 aaKnown RBP2.18□□□□□ -2.06
DDR48YMR173W COS5P47187 383 aa2.18□□□□□ -2.06
DDR48YMR173W RRP45Q05636 305 aaKnown RBP2.18□□□□□ -2.06
DDR48YMR173W COS7Q07788 383 aa2.18□□□□□ -2.06
DDR48YMR173W SIL1Q08199 421 aa2.18□□□□□ -2.06
DDR48YMR173W DNL4Q08387 944 aaPredicted RBP2.18□□□□□ -2.06
DDR48YMR173W IES4Q08561 116 aa2.18□□□□□ -2.06
DDR48YMR173W AHC1Q12433 566 aa2.18□□□□□ -2.06
DDR48YMR173W NAM2P11325 894 aa2.17□□□□□ -2.06
DDR48YMR173W RHB1P25378 209 aa2.17□□□□□ -2.06
DDR48YMR173W PHA2P32452 334 aa2.17□□□□□ -2.06
DDR48YMR173W SBE22P38814 852 aa2.17□□□□□ -2.06
DDR48YMR173W YIL029CP40538 142 aa2.17□□□□□ -2.06
DDR48YMR173W MNP1P53163 194 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms