RNA–Protein interactions for RNA: YMR025W

CSI1, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSI1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSI1YMR025W NIP100P33420 868 aa2.8□□□□□ -1.96
CSI1YMR025W CST26P38226 397 aa2.8□□□□□ -1.96
CSI1YMR025W RTC2P38279 296 aa2.8□□□□□ -1.96
CSI1YMR025W YIF1P53845 314 aaKnown RBP2.8□□□□□ -1.96
CSI1YMR025W RFM1Q12192 310 aa2.8□□□□□ -1.96
CSI1YMR025W PEP1P32319 1579 aa2.79□□□□□ -1.96
CSI1YMR025W SKI3P17883 1432 aaKnown RBP2.79□□□□□ -1.96
CSI1YMR025W SEM1O94742 89 aa2.79□□□□□ -1.96
CSI1YMR025W NOP4P37838 685 aaKnown RBP2.79□□□□□ -1.96
CSI1YMR025W MRPS16Q02608 121 aa2.79□□□□□ -1.96
CSI1YMR025W AIM32Q04689 311 aa2.79□□□□□ -1.96
CSI1YMR025W LIP2Q06005 328 aa2.79□□□□□ -1.96
CSI1YMR025W SGT1Q08446 395 aa2.79□□□□□ -1.96
CSI1YMR025W ORT1Q12375 292 aa2.79□□□□□ -1.96
CSI1YMR025W TRX2P22803 104 aaKnown RBP2.78□□□□□ -1.96
CSI1YMR025W IES6P32617 166 aa2.78□□□□□ -1.96
CSI1YMR025W AZR1P50080 613 aa2.78□□□□□ -1.96
CSI1YMR025W MKC7P53379 596 aa2.78□□□□□ -1.96
CSI1YMR025W SYF1Q04048 859 aaPredicted RBP2.78□□□□□ -1.96
CSI1YMR025W BPT1P14772 1559 aa2.78□□□□□ -1.96
CSI1YMR025W TAF2P23255 1407 aa2.77□□□□□ -1.97
CSI1YMR025W SSN2P38931 1420 aa2.77□□□□□ -1.97
CSI1YMR025W JLP2P40206 208 aa2.77□□□□□ -1.97
CSI1YMR025W MET28P40573 187 aa2.77□□□□□ -1.97
CSI1YMR025W VMA13P41807 478 aaKnown RBP2.77□□□□□ -1.97
CSI1YMR025W TWF1P53250 332 aa2.77□□□□□ -1.97
CSI1YMR025W RHO5P53879 331 aaKnown RBP2.77□□□□□ -1.97
CSI1YMR025W MTQ1P53944 314 aa2.77□□□□□ -1.97
CSI1YMR025W NDE2Q07500 545 aa2.77□□□□□ -1.97
CSI1YMR025W JID1Q12350 301 aa2.77□□□□□ -1.97
CSI1YMR025W OLE1P21147 510 aaKnown RBP2.76□□□□□ -1.97
CSI1YMR025W AAT2P23542 418 aaKnown RBP2.76□□□□□ -1.97
CSI1YMR025W DPB3P27344 201 aa2.76□□□□□ -1.97
CSI1YMR025W SMY1P32364 656 aaKnown RBP2.76□□□□□ -1.97
CSI1YMR025W FLC3P53121 802 aa2.76□□□□□ -1.97
CSI1YMR025W VPS75P53853 264 aa2.76□□□□□ -1.97
CSI1YMR025W NUP116Q02630 1113 aa2.76□□□□□ -1.97
CSI1YMR025W DNL4Q08387 944 aaPredicted RBP2.76□□□□□ -1.97
CSI1YMR025W YML133CQ03099 1374 aa2.75□□□□□ -1.97
CSI1YMR025W YLL067CQ07888 1374 aa2.75□□□□□ -1.97
CSI1YMR025W YLL066CQ99208 1374 aa2.75□□□□□ -1.97
CSI1YMR025W COX4P04037 155 aa2.75□□□□□ -1.97
CSI1YMR025W AAC3P18238 307 aa2.75□□□□□ -1.97
CSI1YMR025W RAD57P25301 460 aa2.75□□□□□ -1.97
CSI1YMR025W SSH4P32343 579 aa2.75□□□□□ -1.97
CSI1YMR025W YEL057CP39983 233 aa2.75□□□□□ -1.97
CSI1YMR025W HMS2P47175 358 aa2.75□□□□□ -1.97
CSI1YMR025W YGR018CP53211 109 aa2.75□□□□□ -1.97
CSI1YMR025W CRH1P53301 507 aa2.75□□□□□ -1.97
CSI1YMR025W BET5Q03630 159 aa2.75□□□□□ -1.97
CSI1YMR025W RMD5Q12508 421 aa2.75□□□□□ -1.97
CSI1YMR025W ENT1Q12518 454 aa2.75□□□□□ -1.97
CSI1YMR025W YHR054CP38780 354 aa2.74□□□□□ -1.97
CSI1YMR025W NOP16P40007 231 aaKnown RBP2.74□□□□□ -1.97
CSI1YMR025W SAS2P40963 338 aa2.74□□□□□ -1.97
CSI1YMR025W ATG2P53855 1592 aa2.74□□□□□ -1.97
CSI1YMR025W ADH1P00330 348 aaKnown RBP2.73□□□□□ -1.97
CSI1YMR025W SEC66P33754 206 aa2.73□□□□□ -1.97
CSI1YMR025W BAT1P38891 393 aaKnown RBP2.73□□□□□ -1.97
CSI1YMR025W OXA1P39952 402 aa2.73□□□□□ -1.97
CSI1YMR025W BIR1P47134 954 aa2.73□□□□□ -1.97
CSI1YMR025W UPF3P48412 387 aaKnown RBP2.73□□□□□ -1.97
CSI1YMR025W UFD4P33202 1483 aa2.72□□□□□ -1.97
CSI1YMR025W ILV5P06168 395 aaKnown RBP2.72□□□□□ -1.97
CSI1YMR025W CBP6P07253 162 aaPredicted RBP2.72□□□□□ -1.97
CSI1YMR025W CYS4P32582 507 aaKnown RBP2.72□□□□□ -1.97
CSI1YMR025W ESL1P40456 1118 aa2.72□□□□□ -1.97
CSI1YMR025W MET5P47169 1442 aa2.72□□□□□ -1.97
CSI1YMR025W BCH1Q05029 724 aa2.72□□□□□ -1.97
CSI1YMR025W SMF3Q12078 473 aaPredicted RBP2.72□□□□□ -1.97
CSI1YMR025W YCF1P39109 1515 aaKnown RBP2.72□□□□□ -1.97
CSI1YMR025W SPS4P09937 338 aa2.71□□□□□ -1.98
CSI1YMR025W SEC63P14906 663 aa2.71□□□□□ -1.98
CSI1YMR025W PMT1P33775 817 aa2.71□□□□□ -1.98
CSI1YMR025W CMC1P36064 111 aa2.71□□□□□ -1.98
CSI1YMR025W PGU1P47180 361 aa2.71□□□□□ -1.98
CSI1YMR025W RIF2Q06208 395 aa2.71□□□□□ -1.98
CSI1YMR025W REX4Q08237 289 aa2.71□□□□□ -1.98
CSI1YMR025W SIN3P22579 1536 aa2.7□□□□□ -1.98
CSI1YMR025W MSI1P13712 422 aa2.7□□□□□ -1.98
CSI1YMR025W PRR1P28708 518 aa2.7□□□□□ -1.98
CSI1YMR025W HXT14P42833 540 aa2.7□□□□□ -1.98
CSI1YMR025W PFS2P42841 465 aaKnown RBP2.7□□□□□ -1.98
CSI1YMR025W VTC2P43585 828 aa2.7□□□□□ -1.98
CSI1YMR025W RMD8P43620 662 aa2.7□□□□□ -1.98
CSI1YMR025W YFR057WP43625 151 aa2.7□□□□□ -1.98
CSI1YMR025W SKI7Q08491 747 aaPredicted RBP2.7□□□□□ -1.98
CSI1YMR025W ATG29Q12092 213 aa2.7□□□□□ -1.98
CSI1YMR025W RIP1P08067 215 aa2.69□□□□□ -1.98
CSI1YMR025W SBE22P38814 852 aa2.69□□□□□ -1.98
CSI1YMR025W YIL029CP40538 142 aa2.69□□□□□ -1.98
CSI1YMR025W ATP22P50273 684 aaPredicted RBP2.69□□□□□ -1.98
CSI1YMR025W YPS5P53057 165 aa2.69□□□□□ -1.98
CSI1YMR025W GIR2Q03768 265 aaPredicted RBP2.69□□□□□ -1.98
CSI1YMR025W CHD1P32657 1468 aa2.69□□□□□ -1.98
CSI1YMR025W LTE1P07866 1435 aa2.68□□□□□ -1.98
CSI1YMR025W GCN4P03069 281 aa2.68□□□□□ -1.98
CSI1YMR025W GPH1P06738 902 aaKnown RBP2.68□□□□□ -1.98
CSI1YMR025W MET8P15807 274 aa2.68□□□□□ -1.98
CSI1YMR025W SPO12P17123 173 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms