RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeast

Gene VPS71, Length 843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS71	YML041C	ERG1	P32476	496 aa	Known RBP	4.24	□□□□□ -1.73
VPS71	YML041C	ECM25	P32525	599 aa		4.24	□□□□□ -1.73
VPS71	YML041C	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
VPS71	YML041C	SCO2	P38072	301 aa		4.24	□□□□□ -1.73
VPS71	YML041C	STN1	P38960	494 aa		4.24	□□□□□ -1.73
VPS71	YML041C	VPS52	P39904	641 aa		4.24	□□□□□ -1.73
VPS71	YML041C	OSW5	P40219	148 aa		4.24	□□□□□ -1.73
VPS71	YML041C	PCI8	P40512	444 aa		4.24	□□□□□ -1.73
VPS71	YML041C	YIR014W	P40570	242 aa		4.24	□□□□□ -1.73
VPS71	YML041C	PHO86	P46956	311 aa		4.24	□□□□□ -1.73
VPS71	YML041C	EFM3	P47163	339 aa		4.24	□□□□□ -1.73
VPS71	YML041C	DSL1	P53847	754 aa		4.24	□□□□□ -1.73
VPS71	YML041C	STP1	Q00947	519 aa		4.24	□□□□□ -1.73
VPS71	YML041C	TAF12	Q03761	539 aa		4.24	□□□□□ -1.73
VPS71	YML041C	HCR1	Q05775	265 aa	Known RBP	4.24	□□□□□ -1.73
VPS71	YML041C	YDL009C	Q12210	107 aa		4.24	□□□□□ -1.73
VPS71	YML041C	SMY1	P32364	656 aa	Known RBP	4.23	□□□□□ -1.73
VPS71	YML041C	SIP2	P34164	415 aa	Known RBP	4.23	□□□□□ -1.73
VPS71	YML041C	MIC60	P36112	540 aa		4.23	□□□□□ -1.73
VPS71	YML041C	KAP104	P38217	918 aa	Known RBP	4.23	□□□□□ -1.73
VPS71	YML041C	PCF11	P39081	626 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS71	YML041C	YAL037W	P39728	267 aa		4.23	□□□□□ -1.73
VPS71	YML041C	BRO1	P48582	844 aa		4.23	□□□□□ -1.73
VPS71	YML041C	MRPL51	Q06090	140 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS71	YML041C	IPK1	Q06667	281 aa		4.23	□□□□□ -1.73
VPS71	YML041C	HIS4	P00815	799 aa	Known RBP	4.22	□□□□□ -1.73
VPS71	YML041C	CDC23	P16522	626 aa		4.22	□□□□□ -1.73
VPS71	YML041C	GLN3	P18494	730 aa		4.22	□□□□□ -1.73
VPS71	YML041C	HNM1	P19807	563 aa		4.22	□□□□□ -1.73
VPS71	YML041C	SEC62	P21825	274 aa		4.22	□□□□□ -1.73
VPS71	YML041C	GRR1	P24814	1151 aa		4.22	□□□□□ -1.73
VPS71	YML041C	CRM1	P30822	1084 aa	Known RBP	4.22	□□□□□ -1.73
VPS71	YML041C	PCH2	P38126	564 aa		4.22	□□□□□ -1.73
VPS71	YML041C	SPC97	P38863	823 aa		4.22	□□□□□ -1.73
VPS71	YML041C	VPS45	P38932	577 aa		4.22	□□□□□ -1.73
VPS71	YML041C	GAT2	P40209	560 aa		4.22	□□□□□ -1.73
VPS71	YML041C	PAC11	P40960	533 aa		4.22	□□□□□ -1.73
VPS71	YML041C	ELP2	P42935	788 aa		4.22	□□□□□ -1.73
VPS71	YML041C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
VPS71	YML041C	RLI1	Q03195	608 aa	Known RBP	4.22	□□□□□ -1.73
VPS71	YML041C	YDR387C	Q04162	555 aa		4.22	□□□□□ -1.73
VPS71	YML041C	URH1	Q04179	340 aa		4.22	□□□□□ -1.73
VPS71	YML041C	YEH2	Q07950	538 aa		4.22	□□□□□ -1.73
VPS71	YML041C	ORT1	Q12375	292 aa		4.22	□□□□□ -1.73
VPS71	YML041C	GCD2	P12754	651 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS71	YML041C	EXO70	P19658	623 aa		4.21	□□□□□ -1.74
VPS71	YML041C	YCR022C	P25620	114 aa		4.21	□□□□□ -1.74
VPS71	YML041C	GPI16	P38875	610 aa		4.21	□□□□□ -1.74
VPS71	YML041C	HAT2	P39984	401 aa		4.21	□□□□□ -1.74
VPS71	YML041C	YND1	P40009	630 aa		4.21	□□□□□ -1.74
VPS71	YML041C	MKT1	P40850	830 aa	Known RBP	4.21	□□□□□ -1.74
VPS71	YML041C	AZF1	P41696	914 aa		4.21	□□□□□ -1.74
VPS71	YML041C	YIF1	P53845	314 aa	Known RBP	4.21	□□□□□ -1.74
VPS71	YML041C	UTP6	Q02354	440 aa	Known RBP	4.21	□□□□□ -1.74
VPS71	YML041C	IRC15	Q02733	499 aa		4.21	□□□□□ -1.74
VPS71	YML041C	REX4	Q08237	289 aa		4.21	□□□□□ -1.74
VPS71	YML041C	NRT1	Q08485	598 aa		4.21	□□□□□ -1.74
VPS71	YML041C	GEP3	Q08622	556 aa		4.21	□□□□□ -1.74
VPS71	YML041C	SFG1	Q12507	346 aa		4.21	□□□□□ -1.74
VPS71	YML041C	INO80	P53115	1489 aa		4.2	□□□□□ -1.74
VPS71	YML041C	MRS3	P10566	314 aa		4.2	□□□□□ -1.74
VPS71	YML041C	SCH9	P11792	824 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	OM45	P16547	393 aa		4.2	□□□□□ -1.74
VPS71	YML041C	PTP1	P25044	335 aa		4.2	□□□□□ -1.74
VPS71	YML041C	SEC1	P30619	724 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	APE2	P32454	952 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
VPS71	YML041C	RIB7	P33312	244 aa		4.2	□□□□□ -1.74
VPS71	YML041C	MRPL40	P36534	297 aa		4.2	□□□□□ -1.74
VPS71	YML041C	ARC40	P38328	384 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	RRP4	P38792	359 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	YIR016W	P40572	265 aa		4.2	□□□□□ -1.74
VPS71	YML041C	GCD10	P41814	478 aa		4.2	□□□□□ -1.74
VPS71	YML041C	YIP5	P53108	310 aa		4.2	□□□□□ -1.74
VPS71	YML041C	YGL082W	P53155	381 aa		4.2	□□□□□ -1.74
VPS71	YML041C	EGD1	Q02642	157 aa	Known RBP	4.2	□□□□□ -1.74
VPS71	YML041C	YML122C	Q03207	126 aa		4.2	□□□□□ -1.74
VPS71	YML041C	YMR034C	Q05131	434 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS71	YML041C	VPS74	Q06385	345 aa		4.2	□□□□□ -1.74
VPS71	YML041C	PFK27	Q12471	397 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS71	YML041C	RMD5	Q12508	421 aa		4.2	□□□□□ -1.74
VPS71	YML041C	CBP2	P03874	630 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS71	YML041C	SAM1	P10659	382 aa	Known RBP	4.19	□□□□□ -1.74
VPS71	YML041C	RPI1	P23250	407 aa	Known RBP	4.19	□□□□□ -1.74
VPS71	YML041C	YCR043C	P25361	127 aa		4.19	□□□□□ -1.74
VPS71	YML041C	PET18	P25362	215 aa		4.19	□□□□□ -1.74
VPS71	YML041C	CYS4	P32582	507 aa	Known RBP	4.19	□□□□□ -1.74
VPS71	YML041C	ATO2	P32907	282 aa		4.19	□□□□□ -1.74
VPS71	YML041C	SPT10	P35208	640 aa		4.19	□□□□□ -1.74
VPS71	YML041C	MSG5	P38590	489 aa		4.19	□□□□□ -1.74
VPS71	YML041C	STP2	P38704	541 aa		4.19	□□□□□ -1.74
VPS71	YML041C	MNL1	P38888	796 aa		4.19	□□□□□ -1.74
VPS71	YML041C	ISC1	P40015	477 aa	Known RBP	4.19	□□□□□ -1.74
VPS71	YML041C	TES1	P41903	349 aa	Known RBP	4.19	□□□□□ -1.74
VPS71	YML041C	YIP1	P53039	248 aa		4.19	□□□□□ -1.74
VPS71	YML041C	ROG1	P53118	685 aa		4.19	□□□□□ -1.74
VPS71	YML041C	MPS2	P53159	387 aa		4.19	□□□□□ -1.74
VPS71	YML041C	PNG1	Q02890	363 aa		4.19	□□□□□ -1.74
VPS71	YML041C	AAD15	Q08361	143 aa		4.19	□□□□□ -1.74
VPS71	YML041C	SKI7	Q08491	747 aa	Predicted RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms