RNA–Protein interactions for RNA: YLR311C

YLR311C, Transcript of Dubious open reading frame, yeast

Gene YLR311C, Length 348 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR311C	YLR311C	SPB1	P25582	841 aa	Predicted RBP	3.9	□□□□□ -1.79
YLR311C	YLR311C	PPM1	Q04081	328 aa		3.9	□□□□□ -1.79
YLR311C	YLR311C	YDR387C	Q04162	555 aa		3.9	□□□□□ -1.79
YLR311C	YLR311C	ECM27	P47144	725 aa		3.89	□□□□□ -1.79
YLR311C	YLR311C	CWC25	P53854	179 aa	Known RBP	3.89	□□□□□ -1.79
YLR311C	YLR311C	HAL1	Q01766	294 aa		3.89	□□□□□ -1.79
YLR311C	YLR311C	RSN1	Q03516	953 aa		3.89	□□□□□ -1.79
YLR311C	YLR311C	ROY1	Q04847	553 aa		3.89	□□□□□ -1.79
YLR311C	YLR311C	YPR022C	Q12139	1133 aa		3.89	□□□□□ -1.79
YLR311C	YLR311C	RPL3	P14126	387 aa	Known RBP	3.88	□□□□□ -1.79
YLR311C	YLR311C	PPH22	P23595	377 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	APE2	P32454	952 aa	Known RBP	3.88	□□□□□ -1.79
YLR311C	YLR311C	HCS1	P34243	683 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	RSC1	P53236	928 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	HXT11	P54862	567 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	YMR181C	Q03231	154 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	HSP31	Q04432	237 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	ERB1	Q04660	807 aa	Known RBP	3.88	□□□□□ -1.79
YLR311C	YLR311C	SMC6	Q12749	1114 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	YRF1-4	O13559	1382 aa		3.88	□□□□□ -1.79
YLR311C	YLR311C	SLY1	P22213	666 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	GEX1	P25596	615 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	DBF4	P32325	704 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	ECM25	P32525	599 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	YME2	P32843	850 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	UTH1	P36135	365 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	MSG5	P38590	489 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	SSU1	P41930	458 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	KTR5	P53966	522 aa	Predicted RBP	3.87	□□□□□ -1.79
YLR311C	YLR311C	RMT2	Q03305	412 aa		3.87	□□□□□ -1.79
YLR311C	YLR311C	SPS4	P09937	338 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	RPI1	P23250	407 aa	Known RBP	3.86	□□□□□ -1.79
YLR311C	YLR311C	PCL1	P24867	279 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	ERV1	P27882	189 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	LRP1	P38801	184 aa	Known RBP	3.86	□□□□□ -1.79
YLR311C	YLR311C	TFG2	P41896	400 aa	Predicted RBP	3.86	□□□□□ -1.79
YLR311C	YLR311C	TCB2	P48231	1178 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	YIF1	P53845	314 aa	Known RBP	3.86	□□□□□ -1.79
YLR311C	YLR311C	KAP120	Q02932	1032 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	SIL1	Q08199	421 aa		3.86	□□□□□ -1.79
YLR311C	YLR311C	SNX3	Q08826	162 aa	Known RBP	3.86	□□□□□ -1.79
YLR311C	YLR311C	HIS4	P00815	799 aa	Known RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	TRP1	P00912	224 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	GPH1	P06738	902 aa	Known RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	RIP1	P08067	215 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	RPS8A	P0CX39	200 aa	Known RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	RPS8B	P0CX40	200 aa	Known RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	SEC63	P14906	663 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	REC107	P21651	314 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	CLB1	P24868	471 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	MRPL10	P36520	322 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	SRP72	P38688	640 aa	Known RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	COS5	P47187	383 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	FMS1	P50264	508 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	MNP1	P53163	194 aa	Predicted RBP	3.85	□□□□□ -1.79
YLR311C	YLR311C	FRE4	P53746	719 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	DON1	Q05610	365 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	COS7	Q07788	383 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	AFI1	Q99222	893 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	YLR278C	Q05854	1341 aa		3.85	□□□□□ -1.79
YLR311C	YLR311C	TEF1	P02994	458 aa	Known RBP	3.84	□□□□□ -1.79
YLR311C	YLR311C	ARG4	P04076	463 aa	Predicted RBP	3.84	□□□□□ -1.79
YLR311C	YLR311C	CPR2	P23285	205 aa		3.84	□□□□□ -1.79
YLR311C	YLR311C	PRP21	P32524	280 aa	Predicted RBP	3.84	□□□□□ -1.79
YLR311C	YLR311C	MUD1	P32605	298 aa	Known RBP	3.84	□□□□□ -1.79
YLR311C	YLR311C	NIP100	P33420	868 aa		3.84	□□□□□ -1.79
YLR311C	YLR311C	RFC3	P38629	340 aa		3.84	□□□□□ -1.79
YLR311C	YLR311C	SKO1	Q02100	647 aa		3.84	□□□□□ -1.79
YLR311C	YLR311C	ISA2	Q12425	185 aa		3.84	□□□□□ -1.79
YLR311C	YLR311C	NFT1	P0CE68	1218 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	PXA2	P34230	853 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	LYS1	P38998	373 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
YLR311C	YLR311C	CCT2	P39076	527 aa	Known RBP	3.83	□□□□□ -1.8
YLR311C	YLR311C	ZIM17	P42844	174 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	MTM1	P53320	366 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	AIM32	Q04689	311 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	RRP45	Q05636	305 aa	Known RBP	3.83	□□□□□ -1.8
YLR311C	YLR311C	IRC25	Q07951	179 aa		3.83	□□□□□ -1.8
YLR311C	YLR311C	SNU66	Q12420	587 aa	Predicted RBP	3.83	□□□□□ -1.8
YLR311C	YLR311C	POP5	P28005	173 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	PEX5	P35056	612 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	KKQ8	P36004	724 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	CAK1	P43568	368 aa	Predicted RBP	3.82	□□□□□ -1.8
YLR311C	YLR311C	YGL138C	P53122	345 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	YNR048W	P53740	393 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	APJ1	P53940	528 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	MDM30	Q05930	598 aa		3.82	□□□□□ -1.8
YLR311C	YLR311C	RKM1	Q08961	583 aa	Predicted RBP	3.82	□□□□□ -1.8
YLR311C	YLR311C	ITR1	P30605	584 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	SIN4	P32259	974 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	NTC20	P38302	140 aa	Predicted RBP	3.81	□□□□□ -1.8
YLR311C	YLR311C	VHC1	P38329	1120 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	YHR054C	P38780	354 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	RPT4	P53549	437 aa	Known RBP	3.81	□□□□□ -1.8
YLR311C	YLR311C	VPS9	P54787	451 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	REX4	Q08237	289 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	SGT1	Q08446	395 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	FDH1	Q08911	376 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	VAM3	Q12241	283 aa		3.81	□□□□□ -1.8
YLR311C	YLR311C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms