RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YIL024CP40543 189 aa2.29□□□□□ -2.04
VPS13YLL040C NUP85P46673 744 aa2.29□□□□□ -2.04
VPS13YLL040C RCR2Q03446 210 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C PDR8Q06149 701 aa2.29□□□□□ -2.04
VPS13YLL040C TSR2Q06672 205 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C BDS1Q08347 646 aa2.29□□□□□ -2.04
VPS13YLL040C PGC1Q08959 321 aa2.29□□□□□ -2.04
VPS13YLL040C RRP12Q12754 1228 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C FPS1P23900 669 aa2.29□□□□□ -2.04
VPS13YLL040C NPL6P32832 435 aa2.29□□□□□ -2.04
VPS13YLL040C PEX6P33760 1030 aa2.29□□□□□ -2.04
VPS13YLL040C YBR139WP38109 508 aa2.29□□□□□ -2.04
VPS13YLL040C ATG14P38270 344 aa2.29□□□□□ -2.04
VPS13YLL040C HAM1P47119 197 aaKnown RBP2.29□□□□□ -2.04
VPS13YLL040C STP1Q00947 519 aa2.29□□□□□ -2.04
VPS13YLL040C YNG1Q08465 219 aa2.29□□□□□ -2.04
VPS13YLL040C SET6Q12529 373 aa2.29□□□□□ -2.04
VPS13YLL040C GSC2P40989 1895 aa2.29□□□□□ -2.04
VPS13YLL040C CBP1P07252 654 aa2.28□□□□□ -2.04
VPS13YLL040C CAR2P07991 424 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C LDS1P31379 325 aa2.28□□□□□ -2.04
VPS13YLL040C IRC18P47056 224 aa2.28□□□□□ -2.04
VPS13YLL040C RNR4P49723 345 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C YGL101WP53144 215 aa2.28□□□□□ -2.04
VPS13YLL040C YMR099CQ03161 297 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C HOT1Q03213 719 aa2.28□□□□□ -2.04
VPS13YLL040C RRN11Q04712 507 aa2.28□□□□□ -2.04
VPS13YLL040C YLL007CQ07799 665 aa2.28□□□□□ -2.04
VPS13YLL040C MHT1Q12525 324 aa2.28□□□□□ -2.04
VPS13YLL040C AHC2P25649 128 aa2.28□□□□□ -2.04
VPS13YLL040C RRN6P32786 894 aa2.28□□□□□ -2.04
VPS13YLL040C ECM15P35195 104 aa2.28□□□□□ -2.04
VPS13YLL040C SPF1P39986 1215 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C PRY3P47033 881 aa2.28□□□□□ -2.04
VPS13YLL040C LOH1P47055 219 aa2.28□□□□□ -2.04
VPS13YLL040C GPG1P53130 126 aa2.28□□□□□ -2.04
VPS13YLL040C MRH4P53166 561 aa2.28□□□□□ -2.04
VPS13YLL040C CGR1P53188 120 aa2.28□□□□□ -2.04
VPS13YLL040C IMO32P53219 342 aa2.28□□□□□ -2.04
VPS13YLL040C RDR1Q08904 546 aa2.28□□□□□ -2.04
VPS13YLL040C YIH1P25637 258 aa2.28□□□□□ -2.04
VPS13YLL040C VMA8P32610 256 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C MLH1P38920 769 aa2.28□□□□□ -2.04
VPS13YLL040C GUF1P46943 645 aa2.28□□□□□ -2.04
VPS13YLL040C DMA2P53924 522 aa2.28□□□□□ -2.04
VPS13YLL040C HDA2Q06629 674 aa2.28□□□□□ -2.04
VPS13YLL040C RCL1Q08096 367 aaPredicted RBP2.28□□□□□ -2.04
VPS13YLL040C RKM5Q12367 367 aa2.28□□□□□ -2.04
VPS13YLL040C YPL247CQ12523 523 aa2.28□□□□□ -2.04
VPS13YLL040C PRB1P09232 635 aa2.28□□□□□ -2.04
VPS13YLL040C YSR3P23501 404 aa2.28□□□□□ -2.04
VPS13YLL040C YHR219WP38900 624 aa2.28□□□□□ -2.04
VPS13YLL040C ALD5P40047 520 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C NRD1P53617 575 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
VPS13YLL040C EMG1Q06287 252 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C BBP1Q12365 385 aa2.28□□□□□ -2.04
VPS13YLL040C SEM1O94742 89 aa2.28□□□□□ -2.04
VPS13YLL040C PRC1P00729 532 aa2.28□□□□□ -2.04
VPS13YLL040C ALG7P07286 448 aa2.28□□□□□ -2.04
VPS13YLL040C FUS1P11710 512 aa2.28□□□□□ -2.04
VPS13YLL040C CDC13P32797 924 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C PDR3P33200 976 aa2.28□□□□□ -2.04
VPS13YLL040C ATM1P40416 690 aa2.28□□□□□ -2.04
VPS13YLL040C PKP1P40530 394 aa2.28□□□□□ -2.04
VPS13YLL040C ULP2P40537 1034 aaPredicted RBP2.28□□□□□ -2.04
VPS13YLL040C MUP1P50276 574 aa2.28□□□□□ -2.04
VPS13YLL040C OAZ1Q02803 292 aa2.28□□□□□ -2.04
VPS13YLL040C YMR310CQ04867 317 aaPredicted RBP2.28□□□□□ -2.04
VPS13YLL040C YLR049CQ12110 428 aa2.28□□□□□ -2.04
VPS13YLL040C APE1P14904 514 aa2.28□□□□□ -2.04
VPS13YLL040C YGR210CP42942 411 aa2.28□□□□□ -2.04
VPS13YLL040C YFL040WP43562 540 aa2.28□□□□□ -2.04
VPS13YLL040C RPS10BP46784 105 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C YGL235WP53071 178 aa2.28□□□□□ -2.04
VPS13YLL040C YGR016WP53209 190 aa2.28□□□□□ -2.04
VPS13YLL040C PRM15Q03262 622 aa2.28□□□□□ -2.04
VPS13YLL040C YDR344CQ05510 147 aa2.28□□□□□ -2.04
VPS13YLL040C RPS10AQ08745 105 aaPredicted RBP2.28□□□□□ -2.04
VPS13YLL040C SPE1P08432 466 aa2.28□□□□□ -2.04
VPS13YLL040C MRPL8P22353 238 aa2.28□□□□□ -2.04
VPS13YLL040C YCK1P23291 538 aa2.28□□□□□ -2.04
VPS13YLL040C SYN8P31377 255 aa2.28□□□□□ -2.04
VPS13YLL040C ARP2P32381 391 aaKnown RBP2.28□□□□□ -2.04
VPS13YLL040C DOA4P32571 926 aa2.28□□□□□ -2.04
VPS13YLL040C TAF14P35189 244 aa2.28□□□□□ -2.04
VPS13YLL040C YOR062CP36025 268 aa2.28□□□□□ -2.04
VPS13YLL040C MRPL17P36528 281 aa2.28□□□□□ -2.04
VPS13YLL040C NDE1P40215 560 aa2.28□□□□□ -2.04
VPS13YLL040C OKP1P53298 406 aa2.28□□□□□ -2.04
VPS13YLL040C RMI1Q02685 241 aa2.28□□□□□ -2.04
VPS13YLL040C GCN5Q03330 439 aa2.28□□□□□ -2.04
VPS13YLL040C YDL199CQ12407 687 aa2.28□□□□□ -2.04
VPS13YLL040C ECT1P33412 323 aa2.28□□□□□ -2.05
VPS13YLL040C APL3P38065 1025 aa2.28□□□□□ -2.05
VPS13YLL040C RIM11P38615 370 aa2.28□□□□□ -2.05
VPS13YLL040C YJL206CP39529 758 aa2.28□□□□□ -2.05
VPS13YLL040C SIT1P39980 628 aa2.28□□□□□ -2.05
VPS13YLL040C YGR201CP42936 225 aa2.28□□□□□ -2.05
VPS13YLL040C KXD1P53158 218 aa2.28□□□□□ -2.05
VPS13YLL040C NMA111P53920 997 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms