RNA–Protein interactions for RNA: YKR037C

SPC34, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC34	YKR037C	COS5	P47187	383 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	CUL3	P53202	744 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	YGR111W	P53265	400 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	SKO1	Q02100	647 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	YPL014W	Q02606	381 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	PEX25	Q02969	394 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	CTL1	Q03220	320 aa	Known RBP	4.89	□□□□□ -1.63
SPC34	YKR037C	COS7	Q07788	383 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	YOR365C	Q08844	703 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	CRC1	Q12289	327 aa		4.89	□□□□□ -1.63
SPC34	YKR037C	RAD52	P06778	471 aa	Known RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	RHO2	P06781	192 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	RIP1	P08067	215 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	YAP1	P19880	650 aa	Known RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	RRP7	P25368	297 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	DUG2	P38149	878 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	SLM4	P38247	162 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	NDT80	P38830	627 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	CFD1	P40558	293 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	OCA1	P50946	238 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	DRN1	P53255	507 aa	Known RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	SLG1	P54867	378 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	HOT1	Q03213	719 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	HEL2	Q05580	639 aa	Known RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	SSK1	Q07084	712 aa		4.88	□□□□□ -1.63
SPC34	YKR037C	BRR1	Q99177	341 aa	Predicted RBP	4.88	□□□□□ -1.63
SPC34	YKR037C	URA4	P20051	364 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	SNC1	P31109	117 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	NIP100	P33420	868 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	MSN2	P33748	704 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	ARA1	P38115	344 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	YHR054C	P38780	354 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	CAJ1	P39101	391 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	CHS6	P40955	746 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	GAT1	P43574	510 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	YGR016W	P53209	190 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	NUP100	Q02629	959 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	VTC3	Q02725	835 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	DCI1	Q08558	271 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	YIL046W-A	Q3E7Z4	54 aa		4.87	□□□□□ -1.63
SPC34	YKR037C	GPH1	P06738	902 aa	Known RBP	4.86	□□□□□ -1.63
SPC34	YKR037C	HMT1	P38074	348 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	POP1	P41812	875 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	LAM5	P43560	674 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	RMD9	P53140	646 aa	Known RBP	4.86	□□□□□ -1.63
SPC34	YKR037C	LGE1	Q02796	332 aa	Known RBP	4.86	□□□□□ -1.63
SPC34	YKR037C	IZH1	Q03419	316 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	EKI1	Q03764	534 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	ACL4	Q03771	387 aa		4.86	□□□□□ -1.63
SPC34	YKR037C	DNL4	Q08387	944 aa	Predicted RBP	4.86	□□□□□ -1.63
SPC34	YKR037C	RPN5	Q12250	445 aa	Known RBP	4.86	□□□□□ -1.63
SPC34	YKR037C	YPR089W	O13585	888 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	SGV1	P23293	657 aa	Known RBP	4.85	□□□□□ -1.63
SPC34	YKR037C	BRF1	P29056	596 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	PRO3	P32263	286 aa	Known RBP	4.85	□□□□□ -1.63
SPC34	YKR037C	LTV1	P34078	463 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	VHC1	P38329	1120 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	PCA1	P38360	1216 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	YJR154W	P47181	346 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	YMR130W	Q04223	302 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	THI7	Q05998	598 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	DIC1	Q06143	298 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	VAM3	Q12241	283 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	HIF1	Q12373	385 aa		4.85	□□□□□ -1.63
SPC34	YKR037C	IPP1	P00817	287 aa	Known RBP	4.84	□□□□□ -1.63
SPC34	YKR037C	HAP2	P06774	265 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	ATP10	P18496	279 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	TYR1	P20049	452 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	RSA4	P25382	515 aa	Known RBP	4.84	□□□□□ -1.63
SPC34	YKR037C	RPS2	P25443	254 aa	Known RBP	4.84	□□□□□ -1.63
SPC34	YKR037C	PUP2	P32379	260 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	SRX1	P36077	127 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	PIM1	P36775	1133 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	MMS4	P38257	691 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	SER3	P40054	469 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	YMR147W	P40218	223 aa	Known RBP	4.84	□□□□□ -1.63
SPC34	YKR037C	ATP22	P50273	684 aa	Predicted RBP	4.84	□□□□□ -1.63
SPC34	YKR037C	RHO4	Q00246	291 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	SEG1	Q04279	960 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	RSF1	Q05043	376 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	ECI1	Q05871	280 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	GSH2	Q08220	491 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	HER1	Q12276	1246 aa		4.84	□□□□□ -1.63
SPC34	YKR037C	MES1	P00958	751 aa	Known RBP	4.83	□□□□□ -1.64
SPC34	YKR037C	BAR1	P12630	587 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	CLN1	P20437	546 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	GID7	P25569	745 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	ATP11	P32453	318 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	HIR2	P32480	875 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	PHD1	P36093	366 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	YPK3	P38070	525 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	XBP1	P40489	647 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	YPS6	P40583	537 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	RPS0B	P46654	252 aa	Known RBP	4.83	□□□□□ -1.64
SPC34	YKR037C	KTR5	P53966	522 aa	Predicted RBP	4.83	□□□□□ -1.64
SPC34	YKR037C	SUR7	P54003	302 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	RIM13	Q03792	727 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	GLO2	Q05584	274 aa		4.83	□□□□□ -1.64
SPC34	YKR037C	DIS3	Q08162	1001 aa	Known RBP	4.83	□□□□□ -1.64
SPC34	YKR037C	UAF30	Q08747	228 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms