RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	AHC1	Q12433	566 aa		4.21	□□□□□ -1.74
TFA1	YKL028W	LAM4	P38800	1345 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	ARG4	P04076	463 aa	Predicted RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	CHO1	P08456	276 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	WHI2	P12611	486 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	PTC6	P25646	442 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	YPS1	P32329	569 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	ARO4	P32449	370 aa	Known RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	MEI5	P32489	222 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	MGM101	P32787	269 aa	Known RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	FRE1	P32791	686 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	RPC34	P32910	317 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	BUD2	P33314	1104 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
TFA1	YKL028W	YHR122W	P38829	231 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	PCF11	P39081	626 aa	Predicted RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	SHQ1	P40486	507 aa	Predicted RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	FMC1	P40491	155 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	PAC11	P40960	533 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	TOS3	P43637	560 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	BUL1	P48524	976 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	BIO3	P50277	480 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	KTR6	P54070	446 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	APM1	Q00776	475 aa	Predicted RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	HRD3	Q05787	833 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	ARO10	Q06408	635 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	GPN3	Q06543	272 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	YDL057W	Q07379	328 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	THP1	Q08231	455 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	NRT1	Q08485	598 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	PEX27	Q08580	376 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	GEP3	Q08622	556 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	LSP1	Q12230	341 aa	Known RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	ZPS1	Q12512	249 aa		4.2	□□□□□ -1.74
TFA1	YKL028W	BRR1	Q99177	341 aa	Predicted RBP	4.2	□□□□□ -1.74
TFA1	YKL028W	MRP2	P10663	115 aa	Predicted RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	RAP1	P11938	827 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	PRP21	P32524	280 aa	Predicted RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	RAD23	P32628	398 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	PRS1	P32895	427 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	SOR1	P35497	357 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	OTU1	P43558	301 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	TRF5	P48561	642 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	YNL260C	P53846	198 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	SNZ1	Q03148	297 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	GFD1	Q04839	188 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	MRPL35	Q06678	367 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	SOR2	Q07786	357 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	PKH2	Q12236	1081 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	YDR262W	Q12331	272 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	PAA1	Q12447	191 aa	Known RBP	4.19	□□□□□ -1.74
TFA1	YKL028W	RMD5	Q12508	421 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	SPO24	Q3E752	67 aa		4.19	□□□□□ -1.74
TFA1	YKL028W	CDC21	P06785	304 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	ECT1	P33412	323 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	RPC25	P35718	212 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	BNA4	P38169	460 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	TCM62	P38228	572 aa	Known RBP	4.18	□□□□□ -1.74
TFA1	YKL028W	INM1	P38710	295 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	YHR177W	P38867	453 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	PRP39	P39682	629 aa	Known RBP	4.18	□□□□□ -1.74
TFA1	YKL028W	YPS6	P40583	537 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	PMT6	P42934	759 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	BNA3	P47039	444 aa	Known RBP	4.18	□□□□□ -1.74
TFA1	YKL028W	YJR011C	P47086	261 aa	Predicted RBP	4.18	□□□□□ -1.74
TFA1	YKL028W	SHR3	Q02774	210 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	PFA5	Q03289	374 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	GTO3	Q04806	366 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	YLR040C	Q07988	224 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	YOR365C	Q08844	703 aa		4.18	□□□□□ -1.74
TFA1	YKL028W	AHA1	Q12449	350 aa	Known RBP	4.18	□□□□□ -1.74
TFA1	YKL028W	CFT1	Q06632	1357 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	CDC36	P06100	191 aa	Predicted RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	TKL1	P23254	680 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	DAL2	P25335	343 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	MRPL9	P31334	269 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	SAC1	P32368	623 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	SRB4	P32569	687 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	EMP70	P32802	667 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	REC114	P32841	428 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	SPT10	P35208	640 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	MIA40	P36046	403 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	RTC2	P38279	296 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	SLX1	P38324	304 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	ARP1	P38696	384 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	RRP4	P38792	359 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	CCT2	P39076	527 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	QRI1	P43123	477 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	BNA6	P43619	295 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	SNG1	P46950	547 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	PHO86	P46956	311 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	ZPR1	P53303	486 aa	Known RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	YPR003C	P53394	754 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	RSN1	Q03516	953 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	TAF12	Q03761	539 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	DIB1	Q06819	143 aa	Predicted RBP	4.17	□□□□□ -1.74
TFA1	YKL028W	SYO1	Q07395	620 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	AAD15	Q08361	143 aa		4.17	□□□□□ -1.74
TFA1	YKL028W	MSF1	P08425	469 aa		4.16	□□□□□ -1.74
TFA1	YKL028W	KSS1	P14681	368 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 142.7 ms