RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YGL138CP53122 345 aa3.17□□□□□ -1.9
YIR040CYIR040C RRP46P53256 223 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C YGR250CP53316 781 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C RPT4P53549 437 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C CUS2P53830 285 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C YNL134CP53912 376 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C TEP1P53916 434 aa3.17□□□□□ -1.9
YIR040CYIR040C AQR1P53943 586 aa3.17□□□□□ -1.9
YIR040CYIR040C DID2P69771 204 aa3.17□□□□□ -1.9
YIR040CYIR040C ARL3Q02804 198 aa3.17□□□□□ -1.9
YIR040CYIR040C NHP10Q03435 203 aa3.17□□□□□ -1.9
YIR040CYIR040C CTK1Q03957 528 aaKnown RBP3.17□□□□□ -1.9
YIR040CYIR040C FAR10Q06001 478 aa3.17□□□□□ -1.9
YIR040CYIR040C HIM1Q06674 414 aa3.17□□□□□ -1.9
YIR040CYIR040C CSM4Q08955 156 aa3.17□□□□□ -1.9
YIR040CYIR040C AIM41Q12032 185 aa3.17□□□□□ -1.9
YIR040CYIR040C BTS1Q12051 335 aa3.17□□□□□ -1.9
YIR040CYIR040C ULA1Q12059 462 aa3.17□□□□□ -1.9
YIR040CYIR040C MLH3Q12083 715 aa3.17□□□□□ -1.9
YIR040CYIR040C SWT1Q12104 458 aa3.17□□□□□ -1.9
YIR040CYIR040C MRH1Q12117 320 aaPredicted RBP3.17□□□□□ -1.9
YIR040CYIR040C DCS2Q12123 353 aa3.17□□□□□ -1.9
YIR040CYIR040C ATG9Q12142 997 aa3.17□□□□□ -1.9
YIR040CYIR040C NSL1Q12143 216 aa3.17□□□□□ -1.9
YIR040CYIR040C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
YIR040CYIR040C YOR214CQ12282 236 aa3.17□□□□□ -1.9
YIR040CYIR040C SUT2Q12286 268 aa3.17□□□□□ -1.9
YIR040CYIR040C YDR061WQ12298 539 aa3.17□□□□□ -1.9
YIR040CYIR040C YOL114CQ12322 202 aa3.17□□□□□ -1.9
YIR040CYIR040C SKM1Q12469 655 aa3.17□□□□□ -1.9
YIR040CYIR040C SRB8P25648 1427 aa3.17□□□□□ -1.9
YIR040CYIR040C QCR7P00128 127 aa3.16□□□□□ -1.9
YIR040CYIR040C CDC28P00546 298 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C PHO5P00635 467 aa3.16□□□□□ -1.9
YIR040CYIR040C ARG4P04076 463 aaPredicted RBP3.16□□□□□ -1.9
YIR040CYIR040C GFA1P14742 717 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C CPR2P23285 205 aa3.16□□□□□ -1.9
YIR040CYIR040C RIT1P23796 513 aa3.16□□□□□ -1.9
YIR040CYIR040C RPL24BP24000 155 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C BUD5P25300 642 aaPredicted RBP3.16□□□□□ -1.9
YIR040CYIR040C CPR4P25334 318 aa3.16□□□□□ -1.9
YIR040CYIR040C FUN26P31381 517 aa3.16□□□□□ -1.9
YIR040CYIR040C MVD1P32377 396 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C PRP21P32524 280 aaPredicted RBP3.16□□□□□ -1.9
YIR040CYIR040C SAC6P32599 642 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C ATO2P32907 282 aa3.16□□□□□ -1.9
YIR040CYIR040C KES1P35844 434 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C DOA1P36037 715 aa3.16□□□□□ -1.9
YIR040CYIR040C RCN1P36054 211 aa3.16□□□□□ -1.9
YIR040CYIR040C ECM8P38246 354 aa3.16□□□□□ -1.9
YIR040CYIR040C STB5P38699 743 aa3.16□□□□□ -1.9
YIR040CYIR040C PRP39P39682 629 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C SEO1P39709 593 aa3.16□□□□□ -1.9
YIR040CYIR040C ECM10P39987 644 aa3.16□□□□□ -1.9
YIR040CYIR040C LRO1P40345 661 aa3.16□□□□□ -1.9
YIR040CYIR040C PAC11P40960 533 aa3.16□□□□□ -1.9
YIR040CYIR040C GZF3P42944 551 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C RPE1P46969 238 aa3.16□□□□□ -1.9
YIR040CYIR040C PUS4P48567 403 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C IMA1P53051 589 aa3.16□□□□□ -1.9
YIR040CYIR040C TWF1P53250 332 aa3.16□□□□□ -1.9
YIR040CYIR040C YNL040WP53960 456 aaPredicted RBP3.16□□□□□ -1.9
YIR040CYIR040C MPS1P54199 764 aa3.16□□□□□ -1.9
YIR040CYIR040C SAE3P89114 91 aa3.16□□□□□ -1.9
YIR040CYIR040C HER2Q03557 464 aa3.16□□□□□ -1.9
YIR040CYIR040C YDR248CQ03786 193 aa3.16□□□□□ -1.9
YIR040CYIR040C RUB1Q03919 77 aa3.16□□□□□ -1.9
YIR040CYIR040C URH1Q04179 340 aa3.16□□□□□ -1.9
YIR040CYIR040C ROY1Q04847 553 aa3.16□□□□□ -1.9
YIR040CYIR040C YDR222WQ04925 415 aa3.16□□□□□ -1.9
YIR040CYIR040C YEH1Q07804 573 aa3.16□□□□□ -1.9
YIR040CYIR040C PML1Q07930 204 aaPredicted RBP3.16□□□□□ -1.9
YIR040CYIR040C PEX15Q08215 383 aa3.16□□□□□ -1.9
YIR040CYIR040C ZEO1Q08245 113 aa3.16□□□□□ -1.9
YIR040CYIR040C YLR053CQ12026 108 aa3.16□□□□□ -1.9
YIR040CYIR040C YRA1Q12159 226 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C INP53Q12271 1107 aa3.16□□□□□ -1.9
YIR040CYIR040C GPM3Q12326 303 aa3.16□□□□□ -1.9
YIR040CYIR040C RPN6Q12377 434 aa3.16□□□□□ -1.9
YIR040CYIR040C DCN1Q12395 269 aa3.16□□□□□ -1.9
YIR040CYIR040C CTF3Q12748 733 aa3.16□□□□□ -1.9
YIR040CYIR040C PNO1Q99216 274 aaKnown RBP3.16□□□□□ -1.9
YIR040CYIR040C ECM3Q99252 613 aa3.16□□□□□ -1.9
YIR040CYIR040C ADE6P38972 1358 aaKnown RBP3.15□□□□□ -1.9
YIR040CYIR040C ADE5,7P07244 802 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C DST1P07273 309 aa3.15□□□□□ -1.91
YIR040CYIR040C ILV2P07342 687 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C RPL35AP0CX84 120 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C RPL35BP0CX85 120 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C PYC1P11154 1178 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C SRV2P17555 526 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C HPR1P17629 752 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C SIR1P21691 654 aa3.15□□□□□ -1.91
YIR040CYIR040C APA2P22108 325 aa3.15□□□□□ -1.91
YIR040CYIR040C SLY1P22213 666 aa3.15□□□□□ -1.91
YIR040CYIR040C AAT2P23542 418 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C PET18P25362 215 aa3.15□□□□□ -1.91
YIR040CYIR040C CHA1P25379 360 aaKnown RBP3.15□□□□□ -1.91
YIR040CYIR040C YUR1P26725 428 aa3.15□□□□□ -1.91
YIR040CYIR040C PEP3P27801 918 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms