RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W TRM7P38238 310 aaKnown RBP10.72□□□□□ -0.69
SIM1YIL123W STP2P38704 541 aa10.72□□□□□ -0.69
SIM1YIL123W PUN1Q06991 263 aa10.72□□□□□ -0.69
SIM1YIL123W LAT1P12695 482 aaKnown RBP10.71□□□□□ -0.69
SIM1YIL123W HCS1P34243 683 aa10.71□□□□□ -0.69
SIM1YIL123W RRP3P38712 501 aaKnown RBP10.71□□□□□ -0.69
SIM1YIL123W MET30P39014 640 aa10.71□□□□□ -0.69
SIM1YIL123W YAR028WP39548 234 aa10.71□□□□□ -0.69
SIM1YIL123W LAS21P40367 830 aa10.71□□□□□ -0.69
SIM1YIL123W PRM10P42946 383 aa10.71□□□□□ -0.69
SIM1YIL123W OAZ1Q02803 292 aa10.71□□□□□ -0.69
SIM1YIL123W PFA4Q12006 378 aa10.71□□□□□ -0.69
SIM1YIL123W SRO7Q12038 1033 aa10.71□□□□□ -0.69
SIM1YIL123W GPR1Q12361 961 aa10.71□□□□□ -0.69
SIM1YIL123W KIN2P13186 1147 aaKnown RBP10.7□□□□□ -0.7
SIM1YIL123W PET309P32522 965 aaPredicted RBP10.7□□□□□ -0.7
SIM1YIL123W RML2P32611 393 aa10.7□□□□□ -0.7
SIM1YIL123W EGD2P38879 174 aaKnown RBP10.7□□□□□ -0.7
SIM1YIL123W RGA1P39083 1007 aa10.7□□□□□ -0.7
SIM1YIL123W SSU1P41930 458 aa10.7□□□□□ -0.7
SIM1YIL123W ROY1Q04847 553 aa10.7□□□□□ -0.7
SIM1YIL123W TEN1Q07921 160 aa10.7□□□□□ -0.7
SIM1YIL123W CDC4P07834 779 aa10.69□□□□□ -0.7
SIM1YIL123W MEI5P32489 222 aa10.69□□□□□ -0.7
SIM1YIL123W SSO1P32867 290 aa10.69□□□□□ -0.7
SIM1YIL123W SCO2P38072 301 aa10.69□□□□□ -0.7
SIM1YIL123W ERG26P53199 349 aaKnown RBP10.69□□□□□ -0.7
SIM1YIL123W DAM1P53267 343 aa10.69□□□□□ -0.7
SIM1YIL123W YVH1Q02256 364 aaKnown RBP10.69□□□□□ -0.7
SIM1YIL123W RSN1Q03516 953 aa10.69□□□□□ -0.7
SIM1YIL123W SPO77Q06134 477 aa10.69□□□□□ -0.7
SIM1YIL123W YLR036CQ07986 203 aa10.69□□□□□ -0.7
SIM1YIL123W REX4Q08237 289 aa10.69□□□□□ -0.7
SIM1YIL123W YOR114WQ12219 294 aa10.69□□□□□ -0.7
SIM1YIL123W MHF1Q3E835 90 aa10.69□□□□□ -0.7
SIM1YIL123W YPR117WQ06116 2489 aa10.68□□□□□ -0.7
SIM1YIL123W STE7P06784 515 aa10.68□□□□□ -0.7
SIM1YIL123W MER1P16523 270 aa10.68□□□□□ -0.7
SIM1YIL123W RPS1BP23248 255 aaKnown RBP10.68□□□□□ -0.7
SIM1YIL123W RPS5P26783 225 aaKnown RBP10.68□□□□□ -0.7
SIM1YIL123W ADE1P27616 306 aa10.68□□□□□ -0.7
SIM1YIL123W PRP21P32524 280 aaPredicted RBP10.68□□□□□ -0.7
SIM1YIL123W MNN2P38069 597 aa10.68□□□□□ -0.7
SIM1YIL123W MUM2P38236 366 aa10.68□□□□□ -0.7
SIM1YIL123W SSZ1P38788 538 aaKnown RBP10.68□□□□□ -0.7
SIM1YIL123W APE4P38821 490 aa10.68□□□□□ -0.7
SIM1YIL123W IES5P40060 125 aa10.68□□□□□ -0.7
SIM1YIL123W AVT6P40074 448 aa10.68□□□□□ -0.7
SIM1YIL123W GCN20P43535 752 aaKnown RBP10.68□□□□□ -0.7
SIM1YIL123W MON1P53129 644 aa10.68□□□□□ -0.7
SIM1YIL123W SED5Q01590 340 aa10.68□□□□□ -0.7
SIM1YIL123W TLG1Q03322 224 aa10.68□□□□□ -0.7
SIM1YIL123W PDR8Q06149 701 aa10.68□□□□□ -0.7
SIM1YIL123W SWA2Q06677 668 aa10.68□□□□□ -0.7
SIM1YIL123W VCX1Q99385 411 aa10.68□□□□□ -0.7
SIM1YIL123W PUT2P07275 575 aa10.67□□□□□ -0.7
SIM1YIL123W DPB2P24482 689 aaPredicted RBP10.67□□□□□ -0.7
SIM1YIL123W VMA6P32366 345 aaKnown RBP10.67□□□□□ -0.7
SIM1YIL123W ECM4P36156 370 aa10.67□□□□□ -0.7
SIM1YIL123W ASC1P38011 319 aaKnown RBP10.67□□□□□ -0.7
SIM1YIL123W ATG14P38270 344 aa10.67□□□□□ -0.7
SIM1YIL123W YHR177WP38867 453 aa10.67□□□□□ -0.7
SIM1YIL123W PAC10P48363 199 aa10.67□□□□□ -0.7
SIM1YIL123W SLD3P53135 668 aa10.67□□□□□ -0.7
SIM1YIL123W COG5P53951 403 aa10.67□□□□□ -0.7
SIM1YIL123W FAP1P53971 965 aa10.67□□□□□ -0.7
SIM1YIL123W TRM82Q03774 444 aa10.67□□□□□ -0.7
SIM1YIL123W SFM1Q12314 213 aa10.67□□□□□ -0.7
SIM1YIL123W YLR111WQ12528 110 aa10.67□□□□□ -0.7
SIM1YIL123W YPL119C-AQ3E751 87 aa10.67□□□□□ -0.7
SIM1YIL123W MEX67Q99257 599 aaKnown RBP10.67□□□□□ -0.7
SIM1YIL123W MED11Q99278 115 aa10.67□□□□□ -0.7
SIM1YIL123W CMP2P14747 604 aa10.67□□□□□ -0.7
SIM1YIL123W CBS2P14905 389 aa10.67□□□□□ -0.7
SIM1YIL123W RHB1P25378 209 aa10.67□□□□□ -0.7
SIM1YIL123W NTR2P36118 322 aaPredicted RBP10.67□□□□□ -0.7
SIM1YIL123W PTC2P39966 464 aaKnown RBP10.67□□□□□ -0.7
SIM1YIL123W QDR2P40474 542 aa10.67□□□□□ -0.7
SIM1YIL123W RAD17P48581 401 aa10.67□□□□□ -0.7
SIM1YIL123W MTQ2Q03920 221 aaPredicted RBP10.67□□□□□ -0.7
SIM1YIL123W RTT10Q08924 1013 aa10.67□□□□□ -0.7
SIM1YIL123W TFB4Q12004 338 aa10.67□□□□□ -0.7
SIM1YIL123W YPR064WQ12492 139 aa10.67□□□□□ -0.7
SIM1YIL123W STT4P37297 1900 aa10.66□□□□□ -0.7
SIM1YIL123W SFC1P33303 322 aa10.66□□□□□ -0.7
SIM1YIL123W YKR023WP36119 530 aaKnown RBP10.66□□□□□ -0.7
SIM1YIL123W APT2P36973 181 aa10.66□□□□□ -0.7
SIM1YIL123W YLF2P38746 405 aa10.66□□□□□ -0.7
SIM1YIL123W SOP4P39543 234 aaPredicted RBP10.66□□□□□ -0.7
SIM1YIL123W SPO73P40031 143 aa10.66□□□□□ -0.7
SIM1YIL123W COG3P40094 801 aa10.66□□□□□ -0.7
SIM1YIL123W VRG4P40107 337 aa10.66□□□□□ -0.7
SIM1YIL123W YGR201CP42936 225 aa10.66□□□□□ -0.7
SIM1YIL123W PRM8P53174 237 aa10.66□□□□□ -0.7
SIM1YIL123W RHO3Q00245 231 aaKnown RBP10.66□□□□□ -0.7
SIM1YIL123W YPL107WQ02873 248 aa10.66□□□□□ -0.7
SIM1YIL123W APC4Q04601 652 aa10.66□□□□□ -0.7
SIM1YIL123W XYL2Q07993 356 aa10.66□□□□□ -0.7
SIM1YIL123W RRP40Q08285 240 aaKnown RBP10.66□□□□□ -0.7
SIM1YIL123W TSC13Q99190 310 aa10.66□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms