RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W RSC6P25632 483 aa7.77□□□□□ -1.17
UFD1YGR048W SCM4P32564 187 aa7.77□□□□□ -1.17
UFD1YGR048W SRB6P32570 121 aa7.77□□□□□ -1.17
UFD1YGR048W SPO23P33757 523 aa7.77□□□□□ -1.17
UFD1YGR048W RPF2P36160 344 aaKnown RBP7.77□□□□□ -1.17
UFD1YGR048W APT2P36973 181 aa7.77□□□□□ -1.17
UFD1YGR048W TOS1P38288 455 aa7.77□□□□□ -1.17
UFD1YGR048W COS8P38723 381 aa7.77□□□□□ -1.17
UFD1YGR048W ERP2P39704 215 aa7.77□□□□□ -1.17
UFD1YGR048W LSM4P40070 187 aaKnown RBP7.77□□□□□ -1.17
UFD1YGR048W VRG4P40107 337 aa7.77□□□□□ -1.17
UFD1YGR048W RFC2P40348 353 aa7.77□□□□□ -1.17
UFD1YGR048W SEC28P40509 296 aaKnown RBP7.77□□□□□ -1.17
UFD1YGR048W ALY2P47029 1046 aa7.77□□□□□ -1.17
UFD1YGR048W FOL2P51601 243 aaKnown RBP7.77□□□□□ -1.17
UFD1YGR048W IMO32P53219 342 aa7.77□□□□□ -1.17
UFD1YGR048W RSM27P53305 110 aa7.77□□□□□ -1.17
UFD1YGR048W NUP116Q02630 1113 aa7.77□□□□□ -1.17
UFD1YGR048W GRX5Q02784 150 aa7.77□□□□□ -1.17
UFD1YGR048W UGO1Q03327 502 aa7.77□□□□□ -1.17
UFD1YGR048W SLD5Q03406 294 aa7.77□□□□□ -1.17
UFD1YGR048W TDA1Q03533 586 aa7.77□□□□□ -1.17
UFD1YGR048W SWF1Q04629 336 aa7.77□□□□□ -1.17
UFD1YGR048W GPN3Q06543 272 aa7.77□□□□□ -1.17
UFD1YGR048W GPI11Q06636 219 aa7.77□□□□□ -1.17
UFD1YGR048W WHI4Q07655 649 aaKnown RBP7.77□□□□□ -1.17
UFD1YGR048W RTN2Q12443 393 aa7.77□□□□□ -1.17
UFD1YGR048W BI4P03879 638 aa7.76□□□□□ -1.17
UFD1YGR048W FUR1P18562 216 aaKnown RBP7.76□□□□□ -1.17
UFD1YGR048W PHO80P20052 293 aa7.76□□□□□ -1.17
UFD1YGR048W SLY1P22213 666 aa7.76□□□□□ -1.17
UFD1YGR048W FUN26P31381 517 aa7.76□□□□□ -1.17
UFD1YGR048W PDC2P32896 925 aa7.76□□□□□ -1.17
UFD1YGR048W SRP102P36057 244 aaPredicted RBP7.76□□□□□ -1.17
UFD1YGR048W SHM2P37291 469 aaKnown RBP7.76□□□□□ -1.17
UFD1YGR048W ROT2P38138 954 aa7.76□□□□□ -1.17
UFD1YGR048W KSP1P38691 1029 aaKnown RBP7.76□□□□□ -1.17
UFD1YGR048W LAG1P38703 411 aa7.76□□□□□ -1.17
UFD1YGR048W SAW1P39735 261 aa7.76□□□□□ -1.17
UFD1YGR048W DUG1P43616 481 aaKnown RBP7.76□□□□□ -1.17
UFD1YGR048W IDS2P46958 469 aa7.76□□□□□ -1.17
UFD1YGR048W SSY5P47002 699 aa7.76□□□□□ -1.17
UFD1YGR048W YNR062CP53748 327 aa7.76□□□□□ -1.17
UFD1YGR048W VPS9P54787 451 aa7.76□□□□□ -1.17
UFD1YGR048W YMR265CQ03508 461 aaKnown RBP7.76□□□□□ -1.17
UFD1YGR048W YDR387CQ04162 555 aa7.76□□□□□ -1.17
UFD1YGR048W AIM33Q04516 312 aa7.76□□□□□ -1.17
UFD1YGR048W CIA1Q05583 330 aa7.76□□□□□ -1.17
UFD1YGR048W GAS2Q06135 555 aa7.76□□□□□ -1.17
UFD1YGR048W RAD34Q06665 692 aa7.76□□□□□ -1.17
UFD1YGR048W THI3Q07471 609 aa7.76□□□□□ -1.17
UFD1YGR048W PNS1Q12412 539 aa7.76□□□□□ -1.17
UFD1YGR048W YGL194C-AQ2V2P6 80 aa7.76□□□□□ -1.17
UFD1YGR048W FRT1Q99332 602 aa7.76□□□□□ -1.17
UFD1YGR048W BI3Q9ZZW7 517 aa7.76□□□□□ -1.17
UFD1YGR048W RAD52P06778 471 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W SPS2P08459 502 aa7.75□□□□□ -1.17
UFD1YGR048W DAL81P21657 970 aa7.75□□□□□ -1.17
UFD1YGR048W PPH22P23595 377 aa7.75□□□□□ -1.17
UFD1YGR048W DAL2P25335 343 aa7.75□□□□□ -1.17
UFD1YGR048W LDS1P31379 325 aa7.75□□□□□ -1.17
UFD1YGR048W MCM10P32354 571 aa7.75□□□□□ -1.17
UFD1YGR048W BCS1P32839 456 aa7.75□□□□□ -1.17
UFD1YGR048W PGM1P33401 570 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W PPE1P38796 400 aa7.75□□□□□ -1.17
UFD1YGR048W IKI1P38874 309 aa7.75□□□□□ -1.17
UFD1YGR048W VPS45P38932 577 aa7.75□□□□□ -1.17
UFD1YGR048W YAR028WP39548 234 aa7.75□□□□□ -1.17
UFD1YGR048W FLC2P39719 783 aa7.75□□□□□ -1.17
UFD1YGR048W FMP52P40008 231 aa7.75□□□□□ -1.17
UFD1YGR048W YMR144WP40214 342 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W UFE1P41834 346 aa7.75□□□□□ -1.17
UFD1YGR048W ASG7P46993 209 aa7.75□□□□□ -1.17
UFD1YGR048W MOG1P47123 218 aa7.75□□□□□ -1.17
UFD1YGR048W SEH1P53011 349 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W NQM1P53228 333 aaPredicted RBP7.75□□□□□ -1.17
UFD1YGR048W YNR068CP53754 272 aa7.75□□□□□ -1.17
UFD1YGR048W LSM7P53905 115 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W PEX13P80667 386 aa7.75□□□□□ -1.17
UFD1YGR048W REG1Q00816 1014 aa7.75□□□□□ -1.17
UFD1YGR048W RBS1Q05672 457 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W ECM30Q06673 1274 aa7.75□□□□□ -1.17
UFD1YGR048W SLF1Q12034 447 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W PKH2Q12236 1081 aaKnown RBP7.75□□□□□ -1.17
UFD1YGR048W CYC1P00044 109 aaPredicted RBP7.74□□□□□ -1.17
UFD1YGR048W FLP1P03870 423 aa7.74□□□□□ -1.17
UFD1YGR048W CYT1P07143 309 aa7.74□□□□□ -1.17
UFD1YGR048W MRPL44P19956 98 aa7.74□□□□□ -1.17
UFD1YGR048W ACE2P21192 770 aa7.74□□□□□ -1.17
UFD1YGR048W ERG9P29704 444 aa7.74□□□□□ -1.17
UFD1YGR048W URA10P30402 227 aa7.74□□□□□ -1.17
UFD1YGR048W RIM1P32445 135 aaKnown RBP7.74□□□□□ -1.17
UFD1YGR048W ATP11P32453 318 aa7.74□□□□□ -1.17
UFD1YGR048W KRE6P32486 720 aa7.74□□□□□ -1.17
UFD1YGR048W ECM25P32525 599 aa7.74□□□□□ -1.17
UFD1YGR048W NGR1P32831 672 aaKnown RBP7.74□□□□□ -1.17
UFD1YGR048W CSG2P35206 410 aa7.74□□□□□ -1.17
UFD1YGR048W YKR051WP36142 418 aa7.74□□□□□ -1.17
UFD1YGR048W SCO2P38072 301 aa7.74□□□□□ -1.17
UFD1YGR048W AVT5P38176 459 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms