RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YOL019W	Q08157	551 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	REC8	Q12188	680 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	LCB4	Q12246	624 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	HMS1	Q12398	434 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	SET6	Q12529	373 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	CYC1	P00044	109 aa	Predicted RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	AAC1	P04710	309 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected
VTC2	YFL004W	SPS2	P08459	502 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	PHO80	P20052	293 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RPS1B	P23248	255 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	PTP1	P25044	335 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	HCM1	P25364	564 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YCL068C	P25593	260 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	PDC2	P32896	925 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RPS1A	P33442	255 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	BSD2	P38356	321 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	LAG1	P38703	411 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YJL218W	P40892	196 aa	Known RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	RPE1	P46969	238 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	TIM54	P47045	478 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YJR030C	P47101	745 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	APP1	P53933	587 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RNH1	Q04740	348 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	SKG3	Q06315	1026 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	OPT2	Q06593	877 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	ZEO1	Q08245	113 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	RRG7	Q08774	242 aa	Predicted RBP	5.26	□□□□□ -1.57
VTC2	YFL004W	PSF3	Q12146	194 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	MHF2	Q3E829	80 aa		5.26	□□□□□ -1.57
VTC2	YFL004W	YFR010W-A	P0C5N0	62 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	PRE8	P23639	250 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	TAH1	P25638	111 aa	Predicted RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	SNC1	P31109	117 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	NDC1	P32500	655 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	SRB6	P32570	121 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	SDH3	P33421	198 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	KSP1	P38691	1029 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	DED81	P38707	554 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	YEN1	P40028	759 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	PIG2	P40187	538 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	RFC2	P40348	353 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YIR035C	P40579	254 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	ERG10	P41338	398 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	HKR1	P41809	1802 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YJL132W	P47014	750 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YJR107W	P47145	328 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YJR154W	P47181	346 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	AAD10	P47182	288 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YNL181W	P53878	407 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	PRP38	Q00723	242 aa	Predicted RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	GAS3	Q03655	524 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	LUC7	Q07508	261 aa	Predicted RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	YOR022C	Q12204	715 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	MTR10	Q99189	972 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	RPL25	P04456	142 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	PET54	P10834	293 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	ZWF1	P11412	505 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	TCP1	P12612	559 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	SAM2	P19358	384 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	EMC1	P25574	760 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	BUB2	P26448	306 aa	Predicted RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	CTS1	P29029	562 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	ATP11	P32453	318 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	SPT10	P35208	640 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	FRE2	P36033	711 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	RIB1	P38066	345 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	ERP2	P39704	215 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	NPP2	P39997	493 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	UTP7	P40055	554 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	MND2	P40577	368 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	MRPS18	P42847	217 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	CAF120	P53836	1060 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YDR131C	Q03899	556 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	HPT1	Q04178	221 aa	Known RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	DIB1	Q06819	143 aa	Predicted RBP	5.25	□□□□□ -1.57
VTC2	YFL004W	YPD1	Q07688	167 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	OSW2	Q12202	724 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	YCL001W-B	Q96VH2	84 aa		5.25	□□□□□ -1.57
VTC2	YFL004W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
VTC2	YFL004W	FUR1	P18562	216 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	CKS1	P20486	150 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	MRPL8	P22353	238 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	YCK2	P23292	546 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	YCR090C	P25654	182 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	CDC5	P32562	705 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	SPO23	P33757	523 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	PMT1	P33775	817 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	MRPL37	P36532	105 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	COS111	P38308	924 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	YMR144W	P40214	342 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	SEC28	P40509	296 aa	Known RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	AGE2	P40529	298 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	HIS6	P40545	261 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	GNA1	P43577	159 aa	Predicted RBP	5.24	□□□□□ -1.57
VTC2	YFL004W	ASG7	P46993	209 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	NBP35	P52920	328 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	CUL3	P53202	744 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	YGR067C	P53243	804 aa		5.24	□□□□□ -1.57
VTC2	YFL004W	ARP4	P80428	489 aa		5.24	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms