RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C YKL071WP36086 256 aa6.25□□□□□ -1.41
SHO1YER118C RTC2P38279 296 aa6.25□□□□□ -1.41
SHO1YER118C PCF11P39081 626 aaPredicted RBP6.25□□□□□ -1.41
SHO1YER118C TFG2P41896 400 aaPredicted RBP6.25□□□□□ -1.41
SHO1YER118C BNA3P47039 444 aaKnown RBP6.25□□□□□ -1.41
SHO1YER118C HSH155P49955 971 aaKnown RBP6.25□□□□□ -1.41
SHO1YER118C COG2P53271 262 aa6.25□□□□□ -1.41
SHO1YER118C YNR014WP53719 212 aa6.25□□□□□ -1.41
SHO1YER118C COX20Q04935 205 aa6.25□□□□□ -1.41
SHO1YER118C SMC5Q08204 1093 aa6.25□□□□□ -1.41
SHO1YER118C GET4Q12125 312 aa6.25□□□□□ -1.41
SHO1YER118C RKI1Q12189 258 aa6.25□□□□□ -1.41
SHO1YER118C ATG31Q12421 196 aa6.25□□□□□ -1.41
SHO1YER118C POL30P15873 258 aaKnown RBP6.24□□□□□ -1.41
SHO1YER118C GBP2P25555 427 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
SHO1YER118C CWP1P28319 239 aa6.24□□□□□ -1.41
SHO1YER118C SHP1P34223 423 aa6.24□□□□□ -1.41
SHO1YER118C OCT1P35999 772 aa6.24□□□□□ -1.41
SHO1YER118C MAL32P38158 584 aa6.24□□□□□ -1.41
SHO1YER118C FMP33P46998 180 aa6.24□□□□□ -1.41
SHO1YER118C HAM1P47119 197 aaKnown RBP6.24□□□□□ -1.41
SHO1YER118C STE24P47154 453 aa6.24□□□□□ -1.41
SHO1YER118C MAL12P53341 584 aa6.24□□□□□ -1.41
SHO1YER118C ATG4P53867 494 aa6.24□□□□□ -1.41
SHO1YER118C ORC3P54790 616 aa6.24□□□□□ -1.41
SHO1YER118C APM1Q00776 475 aaPredicted RBP6.24□□□□□ -1.41
SHO1YER118C RSM23Q01163 450 aa6.24□□□□□ -1.41
SHO1YER118C RLI1Q03195 608 aaKnown RBP6.24□□□□□ -1.41
SHO1YER118C YMR178WQ03219 274 aaKnown RBP6.24□□□□□ -1.41
SHO1YER118C BNA7Q04066 261 aa6.24□□□□□ -1.41
SHO1YER118C SYO1Q07395 620 aa6.24□□□□□ -1.41
SHO1YER118C CMC2Q3E7A4 109 aa6.24□□□□□ -1.41
SHO1YER118C RAP1P11938 827 aa6.23□□□□□ -1.41
SHO1YER118C PRP16P15938 1071 aaPredicted RBP6.23□□□□□ -1.41
SHO1YER118C MTR2P34232 184 aaKnown RBP6.23□□□□□ -1.41
SHO1YER118C SOR1P35497 357 aaKnown RBP6.23□□□□□ -1.41
SHO1YER118C YMR262WP38430 313 aa6.23□□□□□ -1.41
SHO1YER118C INM1P38710 295 aa6.23□□□□□ -1.41
SHO1YER118C ANS1P38832 159 aa6.23□□□□□ -1.41
SHO1YER118C RPS10BP46784 105 aaKnown RBP6.23□□□□□ -1.41
SHO1YER118C YJL118WP47022 219 aa6.23□□□□□ -1.41
SHO1YER118C YDL186WP48568 277 aa6.23□□□□□ -1.41
SHO1YER118C YGR151CP53287 111 aa6.23□□□□□ -1.41
SHO1YER118C SLT2Q00772 484 aa6.23□□□□□ -1.41
SHO1YER118C DLT1Q04216 342 aa6.23□□□□□ -1.41
SHO1YER118C PLM2Q04383 521 aa6.23□□□□□ -1.41
SHO1YER118C YLR283WQ05867 314 aa6.23□□□□□ -1.41
SHO1YER118C DUS4Q06063 367 aa6.23□□□□□ -1.41
SHO1YER118C YDL057WQ07379 328 aa6.23□□□□□ -1.41
SHO1YER118C SHS1Q07657 551 aa6.23□□□□□ -1.41
SHO1YER118C SOR2Q07786 357 aa6.23□□□□□ -1.41
SHO1YER118C THP1Q08231 455 aa6.23□□□□□ -1.41
SHO1YER118C DNL4Q08387 944 aaPredicted RBP6.23□□□□□ -1.41
SHO1YER118C AFT2Q08957 416 aa6.23□□□□□ -1.41
SHO1YER118C USV1Q12132 391 aa6.23□□□□□ -1.41
SHO1YER118C NCE102Q12207 173 aaRIP-Chip data6.23□□□□□ -1.41not detected
SHO1YER118C GLE1Q12315 538 aa6.23□□□□□ -1.41
SHO1YER118C YBL111CQ3E7Y5 667 aa6.23□□□□□ -1.41
SHO1YER118C TDH2P00358 332 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C TDH3P00359 332 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41 RIP-Chip
SHO1YER118C ADE5,7P07244 802 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C MET3P08536 511 aa6.22□□□□□ -1.41
SHO1YER118C RPL18AP0CX49 186 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C RPL18BP0CX50 186 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C STE4P18851 423 aa6.22□□□□□ -1.41
SHO1YER118C ITR1P30605 584 aa6.22□□□□□ -1.41
SHO1YER118C SPT10P35208 640 aa6.22□□□□□ -1.41
SHO1YER118C APL3P38065 1025 aa6.22□□□□□ -1.41
SHO1YER118C RRP4P38792 359 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C SBE22P38814 852 aa6.22□□□□□ -1.41
SHO1YER118C SNL1P40548 159 aa6.22□□□□□ -1.41
SHO1YER118C NMA2P53204 395 aa6.22□□□□□ -1.41
SHO1YER118C TRS23Q03784 219 aa6.22□□□□□ -1.41
SHO1YER118C IRC13Q08630 104 aa6.22□□□□□ -1.41
SHO1YER118C AIM45Q12480 344 aaKnown RBP6.22□□□□□ -1.41
SHO1YER118C LAG2Q92325 660 aa6.22□□□□□ -1.41
SHO1YER118C GDH1P07262 454 aaKnown RBP6.21□□□□□ -1.42
SHO1YER118C GPI12P23797 304 aa6.21□□□□□ -1.42
SHO1YER118C YCP4P25349 247 aaKnown RBP6.21□□□□□ -1.42
SHO1YER118C CIN8P27895 1000 aa6.21□□□□□ -1.42
SHO1YER118C PRP21P32524 280 aaPredicted RBP6.21□□□□□ -1.42
SHO1YER118C RGT1P32862 1170 aa6.21□□□□□ -1.42
SHO1YER118C SKG6P32900 734 aaPredicted RBP6.21□□□□□ -1.42
SHO1YER118C HIS7P33734 552 aaKnown RBP6.21□□□□□ -1.42
SHO1YER118C AIM29P36154 155 aa6.21□□□□□ -1.42
SHO1YER118C STP2P38704 541 aa6.21□□□□□ -1.42
SHO1YER118C RTT107P38850 1070 aa6.21□□□□□ -1.42
SHO1YER118C FET3P38993 636 aa6.21□□□□□ -1.42
SHO1YER118C PRM9P39551 298 aa6.21□□□□□ -1.42
SHO1YER118C YPS6P40583 537 aa6.21□□□□□ -1.42
SHO1YER118C YAR1P46683 200 aa6.21□□□□□ -1.42
SHO1YER118C PHO86P46956 311 aa6.21□□□□□ -1.42
SHO1YER118C SPP2Q02521 185 aa6.21□□□□□ -1.42
SHO1YER118C MRP51Q02950 344 aa6.21□□□□□ -1.42
SHO1YER118C ENT5Q03769 411 aaKnown RBP6.21□□□□□ -1.42
SHO1YER118C AAD15Q08361 143 aa6.21□□□□□ -1.42
SHO1YER118C RAD3P06839 778 aa6.2□□□□□ -1.42
SHO1YER118C YLL053CP0CD98 152 aa6.2□□□□□ -1.42
SHO1YER118C DEG1P31115 442 aaKnown RBP6.2□□□□□ -1.42
SHO1YER118C MSK1P32048 576 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms