RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W CIN1P40987 1014 aa1.48□□□□□ -2.17
SXM1YDR395W YJL107CP42947 387 aa1.48□□□□□ -2.17
SXM1YDR395W YFR018CP43599 363 aa1.48□□□□□ -2.17
SXM1YDR395W GCV1P48015 400 aa1.48□□□□□ -2.17
SXM1YDR395W RMD9P53140 646 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W YGR012WP53206 393 aa1.48□□□□□ -2.17
SXM1YDR395W PXR1P53335 271 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W DIP5P53388 608 aa1.48□□□□□ -2.17
SXM1YDR395W DBP6P53734 629 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W RPL15BP54780 204 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W SRT1Q03175 343 aa1.48□□□□□ -2.17
SXM1YDR395W TRS31Q03337 283 aa1.48□□□□□ -2.17
SXM1YDR395W WAR1Q03631 944 aa1.48□□□□□ -2.17
SXM1YDR395W APC4Q04601 652 aa1.48□□□□□ -2.17
SXM1YDR395W FAR10Q06001 478 aa1.48□□□□□ -2.17
SXM1YDR395W ATG17Q06410 417 aa1.48□□□□□ -2.17
SXM1YDR395W SIL1Q08199 421 aa1.48□□□□□ -2.17
SXM1YDR395W NOP12Q08208 459 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W ATG11Q12527 1178 aa1.48□□□□□ -2.17
SXM1YDR395W LSO2Q3E772 92 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W TDH2P00358 332 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W TDH3P00359 332 aaKnown RBP RIP-Chip data1.48□□□□□ -2.17not detected
SXM1YDR395W ILV5P06168 395 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W SPE1P08432 466 aa1.48□□□□□ -2.17
SXM1YDR395W SAM1P10659 382 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W GAL3P13045 520 aa1.48□□□□□ -2.17
SXM1YDR395W NFS1P25374 497 aa1.48□□□□□ -2.17
SXM1YDR395W PBN1P25580 416 aa1.48□□□□□ -2.17
SXM1YDR395W PRE4P30657 266 aa1.48□□□□□ -2.17
SXM1YDR395W ATP7P30902 174 aa1.48□□□□□ -2.17
SXM1YDR395W PDB1P32473 366 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W PMT1P33775 817 aa1.48□□□□□ -2.17
SXM1YDR395W YBL055CP34220 418 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W ASC1P38011 319 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W DTR1P38125 572 aa1.48□□□□□ -2.17
SXM1YDR395W EHT1P38295 451 aa1.48□□□□□ -2.17
SXM1YDR395W TCD1P38756 429 aa1.48□□□□□ -2.17
SXM1YDR395W RCY1P39531 840 aa1.48□□□□□ -2.17
SXM1YDR395W PFK26P40433 827 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W VHS2P40463 436 aa1.48□□□□□ -2.17
SXM1YDR395W BUD8P41698 603 aa1.48□□□□□ -2.17
SXM1YDR395W TFG2P41896 400 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W YJL132WP47014 750 aa1.48□□□□□ -2.17
SXM1YDR395W PET130P47065 347 aa1.48□□□□□ -2.17
SXM1YDR395W ABM1P47146 123 aa1.48□□□□□ -2.17
SXM1YDR395W PRP31P49704 494 aaPredicted RBP1.48□□□□□ -2.17
SXM1YDR395W ZPR1P53303 486 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W SLT2Q00772 484 aa1.48□□□□□ -2.17
SXM1YDR395W YDC1Q02896 317 aa1.48□□□□□ -2.17
SXM1YDR395W GIS1Q03833 894 aa1.48□□□□□ -2.17
SXM1YDR395W ECM11Q04110 302 aa1.48□□□□□ -2.17
SXM1YDR395W AIM33Q04516 312 aa1.48□□□□□ -2.17
SXM1YDR395W GFD1Q04839 188 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W CDC123Q05791 360 aa1.48□□□□□ -2.17
SXM1YDR395W BAG7Q12128 409 aa1.48□□□□□ -2.17
SXM1YDR395W LPX1Q12405 387 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W RRP12Q12754 1228 aaKnown RBP1.48□□□□□ -2.17
SXM1YDR395W YLR302CO13544 120 aa1.47□□□□□ -2.17
SXM1YDR395W DIF1O13577 133 aa1.47□□□□□ -2.17
SXM1YDR395W YPR089WO13585 888 aa1.47□□□□□ -2.17
SXM1YDR395W TPK2P06245 380 aa1.47□□□□□ -2.17
SXM1YDR395W SCH9P11792 824 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W PEP5P12868 1029 aa1.47□□□□□ -2.17
SXM1YDR395W EST1P17214 699 aaPredicted RBP1.47□□□□□ -2.17
SXM1YDR395W SPO7P18410 259 aa1.47□□□□□ -2.17
SXM1YDR395W PRP4P20053 465 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W UTR1P21373 530 aa1.47□□□□□ -2.17
SXM1YDR395W YCP4P25349 247 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W PEP3P27801 918 aa1.47□□□□□ -2.17
SXM1YDR395W BMH1P29311 267 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W PRO1P32264 428 aa1.47□□□□□ -2.17
SXM1YDR395W TIF3P34167 436 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W SRX1P36077 127 aa1.47□□□□□ -2.17
SXM1YDR395W YMR262WP38430 313 aa1.47□□□□□ -2.17
SXM1YDR395W YHR045WP38775 560 aa1.47□□□□□ -2.17
SXM1YDR395W RTC3P38804 111 aaPredicted RBP1.47□□□□□ -2.17
SXM1YDR395W CAB2P40506 365 aa1.47□□□□□ -2.17
SXM1YDR395W HXT14P42833 540 aa1.47□□□□□ -2.17
SXM1YDR395W YGL117WP53133 265 aa1.47□□□□□ -2.17
SXM1YDR395W YGR126WP53274 230 aa1.47□□□□□ -2.17
SXM1YDR395W SKO1Q02100 647 aa1.47□□□□□ -2.17
SXM1YDR395W SHR3Q02774 210 aa1.47□□□□□ -2.17
SXM1YDR395W STD1Q02794 444 aa1.47□□□□□ -2.17
SXM1YDR395W YDR179W-AQ03983 463 aa1.47□□□□□ -2.17
SXM1YDR395W ARG7Q04728 441 aa1.47□□□□□ -2.17
SXM1YDR395W SPC2Q04969 178 aa1.47□□□□□ -2.17
SXM1YDR395W CTS2Q06350 511 aa1.47□□□□□ -2.17
SXM1YDR395W GRS2Q06817 618 aa1.47□□□□□ -2.17
SXM1YDR395W RAX1Q08760 435 aa1.47□□□□□ -2.17
SXM1YDR395W VIK1Q12045 647 aa1.47□□□□□ -2.17
SXM1YDR395W AEP3Q12089 606 aa1.47□□□□□ -2.17
SXM1YDR395W VAM3Q12241 283 aa1.47□□□□□ -2.17
SXM1YDR395W YDL177CQ12257 170 aa1.47□□□□□ -2.17
SXM1YDR395W PRS5Q12265 496 aaKnown RBP1.47□□□□□ -2.17
SXM1YDR395W ERP3Q12403 225 aa1.47□□□□□ -2.17
SXM1YDR395W DCP1Q12517 231 aaPredicted RBP1.47□□□□□ -2.17
SXM1YDR395W YCL012CQ8J0M4 134 aa1.47□□□□□ -2.17
SXM1YDR395W MEC1P38111 2368 aa1.47□□□□□ -2.17
SXM1YDR395W PRC1P00729 532 aa1.47□□□□□ -2.17
SXM1YDR395W FRS2P15625 503 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms