RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W DMC1P25453 334 aa1.62□□□□□ -2.15
CFT1YDR301W GBP2P25555 427 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
CFT1YDR301W ATP11P32453 318 aa1.62□□□□□ -2.15
CFT1YDR301W DUT1P33317 147 aa1.62□□□□□ -2.15
CFT1YDR301W ASK1P35734 292 aa1.62□□□□□ -2.15
CFT1YDR301W MRPL15P36523 253 aa1.62□□□□□ -2.15
CFT1YDR301W UTP9P38882 575 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W RCY1P39531 840 aa1.62□□□□□ -2.15
CFT1YDR301W VRG4P40107 337 aa1.62□□□□□ -2.15
CFT1YDR301W TIF34P40217 347 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W VHR1P40522 640 aa1.62□□□□□ -2.15
CFT1YDR301W SEC26P41810 973 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W HOC1P47124 396 aa1.62□□□□□ -2.15
CFT1YDR301W ILM1P47155 203 aa1.62□□□□□ -2.15
CFT1YDR301W NIT3P49954 291 aa1.62□□□□□ -2.15
CFT1YDR301W NBP35P52920 328 aa1.62□□□□□ -2.15
CFT1YDR301W LCL3P53153 274 aa1.62□□□□□ -2.15
CFT1YDR301W GET1P53192 235 aa1.62□□□□□ -2.15
CFT1YDR301W YNL095CP53932 642 aa1.62□□□□□ -2.15
CFT1YDR301W PRO2P54885 456 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W ARX1Q03862 593 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W YML096WQ04489 525 aa1.62□□□□□ -2.15
CFT1YDR301W SEC13Q04491 297 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W DFG5Q05031 458 aa1.62□□□□□ -2.15
CFT1YDR301W RSF1Q05043 376 aa1.62□□□□□ -2.15
CFT1YDR301W YLR346CQ06139 101 aa1.62□□□□□ -2.15
CFT1YDR301W TSR2Q06672 205 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W MRL1Q06815 381 aa1.62□□□□□ -2.15
CFT1YDR301W NTG2Q08214 380 aa1.62□□□□□ -2.15
CFT1YDR301W MUM3Q08750 479 aa1.62□□□□□ -2.15
CFT1YDR301W YPL225WQ08971 146 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W YPR202WQ08993 238 aa1.62□□□□□ -2.15
CFT1YDR301W HSP42Q12329 375 aa1.62□□□□□ -2.15
CFT1YDR301W YKL033W-AQ86ZR7 236 aa1.62□□□□□ -2.15
CFT1YDR301W FAB1P34756 2278 aa1.62□□□□□ -2.15
CFT1YDR301W CYR1P08678 2026 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W TY4B-PA0A0B7P3V8 1104 aa1.62□□□□□ -2.15
CFT1YDR301W CAN1P04817 590 aa1.62□□□□□ -2.15
CFT1YDR301W PRP4P20053 465 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W MSB1P21339 1137 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W SAN1P22470 610 aa1.62□□□□□ -2.15
CFT1YDR301W CLB4P24871 460 aa1.62□□□□□ -2.15
CFT1YDR301W CMK1P27466 446 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W YJU2P28320 278 aaPredicted RBP1.62□□□□□ -2.15
CFT1YDR301W SIN4P32259 974 aa1.62□□□□□ -2.15
CFT1YDR301W LOT5P34234 306 aa1.62□□□□□ -2.15
CFT1YDR301W RRN10P38204 145 aa1.62□□□□□ -2.15
CFT1YDR301W YBR184WP38299 523 aa1.62□□□□□ -2.15
CFT1YDR301W STP2P38704 541 aa1.62□□□□□ -2.15
CFT1YDR301W YHL012WP38709 493 aa1.62□□□□□ -2.15
CFT1YDR301W YHR218WP38899 603 aa1.62□□□□□ -2.15
CFT1YDR301W YJL068CP40363 299 aa1.62□□□□□ -2.15
CFT1YDR301W YIL086CP40503 102 aa1.62□□□□□ -2.15
CFT1YDR301W MAM33P40513 266 aa1.62□□□□□ -2.15
CFT1YDR301W APQ12P40532 138 aa1.62□□□□□ -2.15
CFT1YDR301W YIL001WP40560 513 aa1.62□□□□□ -2.15
CFT1YDR301W MAD2P40958 196 aa1.62□□□□□ -2.15
CFT1YDR301W SNM1P40993 198 aa1.62□□□□□ -2.15
CFT1YDR301W GUS1P46655 708 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
CFT1YDR301W GNP1P48813 663 aa1.62□□□□□ -2.15
CFT1YDR301W SGF73P53165 657 aa1.62□□□□□ -2.15
CFT1YDR301W SNO2P53823 222 aa1.62□□□□□ -2.15
CFT1YDR301W REG1Q00816 1014 aa1.62□□□□□ -2.15
CFT1YDR301W TAF12Q03761 539 aa1.62□□□□□ -2.15
CFT1YDR301W RIF2Q06208 395 aa1.62□□□□□ -2.15
CFT1YDR301W MLC2Q06580 163 aa1.62□□□□□ -2.15
CFT1YDR301W YFT2Q06676 274 aa1.62□□□□□ -2.15
CFT1YDR301W YPL066WQ12194 479 aa1.62□□□□□ -2.15
CFT1YDR301W MSS116P15424 664 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W URA4P20051 364 aa1.62□□□□□ -2.15
CFT1YDR301W SGV1P23293 657 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W PTP2P29461 750 aa1.62□□□□□ -2.15
CFT1YDR301W FUN30P31380 1131 aa1.62□□□□□ -2.15
CFT1YDR301W PET309P32522 965 aaPredicted RBP1.62□□□□□ -2.15
CFT1YDR301W CDC5P32562 705 aa1.62□□□□□ -2.15
CFT1YDR301W UGP1P32861 499 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W SFC1P33303 322 aa1.62□□□□□ -2.15
CFT1YDR301W OAR1P35731 278 aa1.62□□□□□ -2.15
CFT1YDR301W MNN2P38069 597 aa1.62□□□□□ -2.15
CFT1YDR301W YBR238CP38330 731 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W INM1P38710 295 aa1.62□□□□□ -2.15
CFT1YDR301W RRP3P38712 501 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W RIC1P40395 1056 aa1.62□□□□□ -2.15
CFT1YDR301W YJR098CP47139 656 aa1.62□□□□□ -2.15
CFT1YDR301W COG2P53271 262 aa1.62□□□□□ -2.15
CFT1YDR301W DSL1P53847 754 aa1.62□□□□□ -2.15
CFT1YDR301W SNP1Q00916 300 aaPredicted RBP1.62□□□□□ -2.15
CFT1YDR301W OAZ1Q02803 292 aa1.62□□□□□ -2.15
CFT1YDR301W YDR239CQ03780 787 aa1.62□□□□□ -2.15
CFT1YDR301W RAD33Q04231 177 aa1.62□□□□□ -2.15
CFT1YDR301W FAR10Q06001 478 aa1.62□□□□□ -2.15
CFT1YDR301W GMC2Q06201 188 aa1.62□□□□□ -2.15
CFT1YDR301W YPS7Q06325 596 aa1.62□□□□□ -2.15
CFT1YDR301W ARO10Q06408 635 aa1.62□□□□□ -2.15
CFT1YDR301W RPN8Q08723 338 aaKnown RBP1.62□□□□□ -2.15
CFT1YDR301W SOG2Q08817 791 aa1.62□□□□□ -2.15
CFT1YDR301W TRP3P00937 484 aa1.61□□□□□ -2.15
CFT1YDR301W PWP1P21304 576 aaKnown RBP1.61□□□□□ -2.15
CFT1YDR301W RPS1BP23248 255 aaKnown RBP1.61□□□□□ -2.15
CFT1YDR301W PTP1P25044 335 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms