RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	DUS3	Q06053	668 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	SYT1	Q06836	1226 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SCP1	Q08873	200 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YOR012W	Q12351	137 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YDL199C	Q12407	687 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SUS1	Q6WNK7	96 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	GCN4	P03069	281 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	CBP6	P07253	162 aa	Predicted RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	SEC53	P07283	254 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-DR6	P0CX70	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-ER1	P0CX71	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-LR2	P0CX72	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-PL	P0CX73	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-JR1	P0CX74	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-LR3	P0CX75	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-ML2	P0CX76	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	WHI2	P12611	486 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	APE1	P14904	514 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	DBR1	P24309	405 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	MKK2	P32491	506 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	CAT2	P32796	670 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	MOT2	P34909	587 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	ABZ1	P37254	787 aa	Predicted RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	STP2	P38704	541 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	PLB1	P39105	664 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	VAB2	P40003	282 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	COA1	P40452	197 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	QRI1	P43123	477 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	SSY5	P47002	699 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	ECM27	P47144	725 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	DIA3	P52290	468 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	HOS2	P53096	452 aa	Predicted RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	GPG1	P53130	126 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YPR003C	P53394	754 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	INN1	P53901	409 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SLM2	P53955	656 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	ARP4	P80428	489 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	SKY1	Q03656	742 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YML037C	Q03703	340 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	YLR224W	Q05947	369 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	DIB1	Q06819	143 aa	Predicted RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	NRT1	Q08485	598 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-GR1	Q12085	440 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	MCD1	Q12158	566 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	ATG34	Q12292	412 aa		4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	TY1A-OL	Q92392	440 aa	Known RBP	4.15	□□□□□ -1.75
UPC2	YDR213W	RAS2	P01120	322 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	PMA1	P05030	918 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	DAT1	P13483	248 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	COX11	P19516	300 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	RAD27	P26793	382 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	PMI40	P29952	429 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	SNC1	P31109	117 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	HIS7	P33734	552 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	SCD5	P34758	872 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YRO2	P38079	344 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	AGP2	P38090	596 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	BIT2	P38346	545 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	STB5	P38699	743 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
UPC2	YDR213W	ACO2	P39533	789 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	PTC2	P39966	464 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	HPA3	P39979	161 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	NDE1	P40215	560 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	RPL10	P41805	221 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	MRPS18	P42847	217 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	BST1	P43571	1029 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
UPC2	YDR213W	NUP85	P46673	744 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	EAF6	P47128	113 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	GTR2	P53290	341 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YMD8	Q03697	442 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YDR131C	Q03899	556 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YDR514C	Q04408	483 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	CDD1	Q06549	142 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	DIS3	Q08162	1001 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
UPC2	YDR213W	NMD4	Q12129	218 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	GIS3	Q12418	502 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	EFG1	Q3E705	233 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	YBR085C-A	O43137	85 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	CHS1	P08004	1131 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	FBP1	P09201	348 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	PUT4	P15380	627 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	CHL1	P22516	861 aa	Predicted RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	LRE1	P25579	583 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	VBA3	P25594	458 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	MRPL6	P32904	214 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	ARC19	P33204	171 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	SPT23	P35210	1082 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	IRS4	P36115	615 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	YKR051W	P36142	418 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	VBA5	P36172	582 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YBR056W	P38081	501 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	BIG1	P38813	335 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	AIM18	P38884	321 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	RCY1	P39531	840 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	EXO1	P39875	702 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms