RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	BEM3	P32873	1128 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RPS1A	P33442	255 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	MSN4	P33749	630 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SRY1	P36007	326 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SPC34	P36131	295 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SHM2	P37291	469 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	POA1	P38218	177 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	FSH1	P38777	243 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	GEP4	P38812	185 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	NSG1	P38837	291 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	NEO1	P40527	1151 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SNG1	P46950	547 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YGR127W	P53275	312 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YPL108W	Q02872	168 aa	Predicted RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	YPL113C	Q02961	396 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	MAK3	Q03503	176 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YDR109C	Q04585	715 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SSL1	Q04673	461 aa	Predicted RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	SEN15	Q04675	128 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RFU1	Q08003	200 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	UAF30	Q08747	228 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	GUP2	Q08929	609 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	GRE2	Q12068	342 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	RRP42	Q12277	265 aa	Predicted RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	SFM1	Q12314	213 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	PCC1	Q3E833	88 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YPR014C	Q6B0W2	109 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RAD52	P06778	471 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	BCY1	P07278	416 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	YPK1	P12688	680 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	URA6	P15700	204 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	HCM1	P25364	564 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	GSP1	P32835	219 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	GSP2	P32836	220 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	SOF1	P33750	489 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	BET3	P36149	193 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YBR013C	P38215	129 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	PAN5	P38787	379 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RAD55	P38953	406 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	IPT1	P38954	527 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YJL206C	P39529	758 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YEL025C	P39991	1188 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	VAB2	P40003	282 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	PEP8	P40335	379 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	MNN10	P50108	393 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	UFD1	P53044	361 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	RRN9	P53437	365 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	CBK1	P53894	756 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	MTQ1	P53944	314 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YNL033W	P53964	284 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YNL019C	P53975	284 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YPL071C	Q02864	156 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	EFR3	Q03653	782 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	TRS130	Q03660	1102 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	CAC2	Q04199	468 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	SMA2	Q04658	369 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	KAR5	Q04746	504 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	UTP21	Q06078	939 aa	Predicted RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	TPO1	Q07824	586 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YOL019W	Q08157	551 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	FAL1	Q12099	399 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	APC9	Q12107	265 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	TRM10	Q12400	293 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	ERG27	Q12452	347 aa	Known RBP	5.05	□□□□□ -1.6
DBF4	YDR052C	LDB19	Q12502	818 aa		5.05	□□□□□ -1.6
DBF4	YDR052C	YIL177C	P40434	1758 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	YJL225C	P40889	1758 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	HTB1	P02293	131 aa	Known RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	HTB2	P02294	131 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	MTF1	P14908	341 aa	Known RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	PUT4	P15380	627 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	CDC50	P25656	391 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	MRPL9	P31334	269 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	MCM10	P32354	571 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	AVT5	P38176	459 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	SHU2	P38957	223 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	ACO2	P39533	789 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	SOP4	P39543	234 aa	Predicted RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	GIM4	P40005	111 aa	Known RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	VRG4	P40107	337 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	DLD2	P46681	530 aa	Known RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	PMT4	P46971	762 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	YJR107W	P47145	328 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	CCC1	P47818	322 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	AMA1	P50082	593 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	YGL039W	P53183	348 aa	Known RBP	5.04	□□□□□ -1.6
DBF4	YDR052C	ERO1	Q03103	563 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	RCO1	Q04779	684 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	OPT2	Q06593	877 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	ESC8	Q08119	714 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	SPC3	Q12133	184 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	RBD2	Q12270	262 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	RIB3	Q99258	208 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	RIF1	P29539	1916 aa		5.04	□□□□□ -1.6
DBF4	YDR052C	MOT1	P32333	1867 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	CAR1	P00812	333 aa	Known RBP	5.03	□□□□□ -1.6
DBF4	YDR052C	SPT3	P06844	337 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	MSS18	P08593	268 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	COS2	P0CX12	379 aa		5.03	□□□□□ -1.6
DBF4	YDR052C	COS3	P0CX13	379 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms