RNA–Protein interactions for RNA: YDL087C

LUC7, Transcript of Essential protein associated with the U1 snRNP complex, yeast

Gene LUC7, Length 786 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LUC7	YDL087C	SNT1	P25357	1226 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	RRP43	P25359	394 aa	Predicted RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	RFA2	P26754	273 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	WBP1	P33767	430 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	TCD2	P36101	447 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	SPP381	P38282	291 aa	Predicted RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	LSM12	P38828	187 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	LNP1	P38878	278 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	AFG3	P39925	761 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	MIT1	P40002	666 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	SER33	P40510	469 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	PCI8	P40512	444 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	NAS2	P40555	220 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	HXT14	P42833	540 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	VMA10	P48836	114 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	YGR079W	P53249	370 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	YAT1	P80235	687 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	RPL6A	Q02326	176 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	MMT1	Q03218	510 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	WAR1	Q03631	944 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	PPM1	Q04081	328 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	DON1	Q05610	365 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	DTD1	Q07648	150 aa	Known RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	NSE1	Q07913	336 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	BAG7	Q12128	409 aa		4.97	□□□□□ -1.61
LUC7	YDL087C	RRP36	Q12481	300 aa	Predicted RBP	4.97	□□□□□ -1.61
LUC7	YDL087C	IPP1	P00817	287 aa	Known RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	SNA3	P14359	133 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	EST1	P17214	699 aa	Predicted RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	VPS3	P23643	1011 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	ITR1	P30605	584 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	NIP1	P32497	812 aa	Known RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	SRB4	P32569	687 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	APL3	P38065	1025 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	POP7	P38291	140 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	RRT2	P38332	387 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	ARO9	P38840	513 aa	Predicted RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	PKP1	P40530	394 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	MAF1	P41910	395 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	FET5	P43561	622 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	YFH7	P43591	353 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	TMA22	P47089	198 aa	Predicted RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	TRF5	P48561	642 aa	Known RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	MRM2	P53123	320 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	DAK1	P54838	584 aa	Known RBP	4.96	□□□□□ -1.62
LUC7	YDL087C	YLR456W	Q06199	204 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	VAC14	Q06708	880 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	YEH2	Q07950	538 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	OSW1	Q08692	278 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	VPS54	Q12071	889 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	PSY3	Q12318	242 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	EMP46	Q12396	444 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	ARP6	Q12509	438 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	LAM4	P38800	1345 aa		4.96	□□□□□ -1.62
LUC7	YDL087C	MF(ALPHA)1	P01149	165 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	RPL1A	P0CX43	217 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	RPL1B	P0CX44	217 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	DBP3	P20447	523 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	ISY1	P21374	235 aa	Predicted RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	ADH7	P25377	361 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	KRE2	P27809	442 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	CDC5	P32562	705 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	GDA1	P32621	518 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	SEF1	P34228	1148 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	ADH5	P38113	351 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	KEL1	P38853	1164 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	SSO2	P39926	295 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	ALD5	P40047	520 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	YER186C	P40101	306 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	IRC8	P47046	822 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	MNP1	P53163	194 aa	Predicted RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	ERV25	P54837	211 aa	Known RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LUC7	YDL087C	PIG1	Q06216	648 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	DXO1	Q06349	442 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	LOT6	Q07923	191 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	DCI1	Q08558	271 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	RKI1	Q12189	258 aa		4.95	□□□□□ -1.62
LUC7	YDL087C	SNU23	Q12368	194 aa	Predicted RBP	4.95	□□□□□ -1.62
LUC7	YDL087C	UBR2	Q07963	1872 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	PDA1	P16387	420 aa	Known RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	SAT4	P25333	603 aa	Known RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	PRD1	P25375	712 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	GSY2	P27472	705 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	YBL010C	P32788	280 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	RCN1	P36054	211 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	NTR2	P36118	322 aa	Predicted RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	MRPL17	P36528	281 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	MAK5	P38112	773 aa	Predicted RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	DIA4	P38705	446 aa	Predicted RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	MTG2	P38860	518 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	YER130C	P39959	443 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	SWP82	P43554	623 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	LSM1	P47017	172 aa	Known RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	IMD3	P50095	523 aa	Known RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	COS6	P53344	381 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	RPT4	P53549	437 aa	Known RBP	4.94	□□□□□ -1.62
LUC7	YDL087C	YNR068C	P53754	272 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	RPM2	Q02773	1202 aa		4.94	□□□□□ -1.62
LUC7	YDL087C	RAD33	Q04231	177 aa		4.94	□□□□□ -1.62

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