RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C NCP1P16603 691 aaKnown RBP1.35□□□□□ -2.19
MSH3YCR092C ATE1P16639 503 aa1.35□□□□□ -2.19
MSH3YCR092C ARF2P19146 181 aaKnown RBP1.35□□□□□ -2.19
MSH3YCR092C RPN12P32496 274 aa1.35□□□□□ -2.19
MSH3YCR092C PPG1P32838 368 aa1.35□□□□□ -2.19
MSH3YCR092C CNS1P33313 385 aa1.35□□□□□ -2.19
MSH3YCR092C SHM2P37291 469 aaKnown RBP1.35□□□□□ -2.19
MSH3YCR092C ECM31P38122 312 aa1.35□□□□□ -2.19
MSH3YCR092C RTT107P38850 1070 aa1.35□□□□□ -2.19
MSH3YCR092C ALP1P38971 573 aa1.35□□□□□ -2.19
MSH3YCR092C END3P39013 349 aa1.35□□□□□ -2.19
MSH3YCR092C SEC26P41810 973 aaKnown RBP1.35□□□□□ -2.19
MSH3YCR092C YHC3P47040 408 aa1.35□□□□□ -2.19
MSH3YCR092C ZIP2P53061 704 aa1.35□□□□□ -2.19
MSH3YCR092C YMR279CQ03263 540 aa1.35□□□□□ -2.19
MSH3YCR092C RSM28Q03430 361 aa1.35□□□□□ -2.19
MSH3YCR092C YDR249CQ03787 373 aa1.35□□□□□ -2.19
MSH3YCR092C ATG10Q07879 167 aa1.35□□□□□ -2.19
MSH3YCR092C YOL073CQ08232 322 aa1.35□□□□□ -2.19
MSH3YCR092C SLD7Q08457 257 aa1.35□□□□□ -2.19
MSH3YCR092C ESA1Q08649 445 aa1.35□□□□□ -2.19
MSH3YCR092C HAL9Q12180 1030 aa1.35□□□□□ -2.19
MSH3YCR092C ERP4Q12450 207 aa1.35□□□□□ -2.19
MSH3YCR092C HRP1Q99383 534 aaKnown RBP1.35□□□□□ -2.19
MSH3YCR092C COX5AP00424 153 aa1.34□□□□□ -2.19
MSH3YCR092C REP1P03871 373 aa1.34□□□□□ -2.19
MSH3YCR092C GPA1P08539 472 aa1.34□□□□□ -2.19
MSH3YCR092C PET123P17558 318 aa1.34□□□□□ -2.19
MSH3YCR092C AAC3P18238 307 aa1.34□□□□□ -2.19
MSH3YCR092C YAP1P19880 650 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C CNA1P23287 553 aa1.34□□□□□ -2.19
MSH3YCR092C SCO1P23833 295 aa1.34□□□□□ -2.19
MSH3YCR092C NAM9P27929 486 aa1.34□□□□□ -2.19
MSH3YCR092C ATS1P31386 333 aa1.34□□□□□ -2.19
MSH3YCR092C PET309P32522 965 aaPredicted RBP1.34□□□□□ -2.19
MSH3YCR092C YME1P32795 747 aa1.34□□□□□ -2.19
MSH3YCR092C SUI1P32911 108 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C LHS1P36016 881 aa1.34□□□□□ -2.19
MSH3YCR092C SCO2P38072 301 aa1.34□□□□□ -2.19
MSH3YCR092C CTP1P38152 299 aa1.34□□□□□ -2.19
MSH3YCR092C POP4P38336 279 aa1.34□□□□□ -2.19
MSH3YCR092C TSL1P38427 1098 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C MUP3P38734 546 aa1.34□□□□□ -2.19
MSH3YCR092C RPP1P38786 293 aa1.34□□□□□ -2.19
MSH3YCR092C YHR182WP38870 785 aa1.34□□□□□ -2.19
MSH3YCR092C PLB1P39105 664 aa1.34□□□□□ -2.19
MSH3YCR092C YER189WP40104 122 aa1.34□□□□□ -2.19
MSH3YCR092C YIL152WP40455 235 aa1.34□□□□□ -2.19
MSH3YCR092C EFM4P40516 257 aa1.34□□□□□ -2.19
MSH3YCR092C ULP2P40537 1034 aaPredicted RBP1.34□□□□□ -2.19
MSH3YCR092C NMD5P46970 1048 aa1.34□□□□□ -2.19
MSH3YCR092C PMT4P46971 762 aa1.34□□□□□ -2.19
MSH3YCR092C BIT61P47041 543 aa1.34□□□□□ -2.19
MSH3YCR092C IKS1P47042 667 aa1.34□□□□□ -2.19
MSH3YCR092C PRP31P49704 494 aaPredicted RBP1.34□□□□□ -2.19
MSH3YCR092C RNR4P49723 345 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C SBH2P52871 88 aa1.34□□□□□ -2.19
MSH3YCR092C YGL235WP53071 178 aa1.34□□□□□ -2.19
MSH3YCR092C YGR053CP53234 283 aa1.34□□□□□ -2.19
MSH3YCR092C YLR460CP54007 376 aa1.34□□□□□ -2.19
MSH3YCR092C RVB1Q03940 463 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C TAF11Q04226 346 aa1.34□□□□□ -2.19
MSH3YCR092C EMI1Q04406 187 aa1.34□□□□□ -2.19
MSH3YCR092C RSA3Q05942 220 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C YOL029CQ08187 201 aa1.34□□□□□ -2.19
MSH3YCR092C RRP40Q08285 240 aaKnown RBP1.34□□□□□ -2.19
MSH3YCR092C GPB1Q08886 897 aa1.34□□□□□ -2.19
MSH3YCR092C PFK27Q12471 397 aaPredicted RBP1.34□□□□□ -2.19
MSH3YCR092C HXK2P04807 486 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C MET2P08465 486 aa1.34□□□□□ -2.2
MSH3YCR092C GAL3P13045 520 aa1.34□□□□□ -2.2
MSH3YCR092C REC107P21651 314 aa1.34□□□□□ -2.2
MSH3YCR092C TRX2P22803 104 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C AIM17P23180 465 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C YCL049CP25577 312 aa1.34□□□□□ -2.2
MSH3YCR092C HRR25P29295 494 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C TOA1P32773 286 aa1.34□□□□□ -2.2
MSH3YCR092C MSN4P33749 630 aa1.34□□□□□ -2.2
MSH3YCR092C YKL102CP34249 101 aa1.34□□□□□ -2.2
MSH3YCR092C HES1P35843 434 aa1.34□□□□□ -2.2
MSH3YCR092C SAP1P39955 897 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C MGS1P40151 587 aa1.34□□□□□ -2.2
MSH3YCR092C PRM10P42946 383 aa1.34□□□□□ -2.2
MSH3YCR092C ASG7P46993 209 aa1.34□□□□□ -2.2
MSH3YCR092C CIS3P47001 227 aa1.34□□□□□ -2.2
MSH3YCR092C UBC9P50623 157 aaPredicted RBP1.34□□□□□ -2.2
MSH3YCR092C RBG2P53295 368 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C IGO1P53897 168 aa1.34□□□□□ -2.2
MSH3YCR092C ACS1Q01574 713 aa1.34□□□□□ -2.2
MSH3YCR092C RPL6AQ02326 176 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C SHR3Q02774 210 aa1.34□□□□□ -2.2
MSH3YCR092C VPS20Q04272 221 aa1.34□□□□□ -2.2
MSH3YCR092C NOP6Q07623 225 aaKnown RBP1.34□□□□□ -2.2
MSH3YCR092C PFA4Q12006 378 aa1.34□□□□□ -2.2
MSH3YCR092C YTM1Q12024 460 aaPredicted RBP1.34□□□□□ -2.2
MSH3YCR092C YLR049CQ12110 428 aa1.34□□□□□ -2.2
MSH3YCR092C MRH1Q12117 320 aaPredicted RBP1.34□□□□□ -2.2
MSH3YCR092C ICT1Q12385 394 aa1.34□□□□□ -2.2
MSH3YCR092C TEL1P38110 2787 aa1.34□□□□□ -2.2
MSH3YCR092C TAO3P40468 2376 aa1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms