RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C ORC2P32833 620 aa5.9□□□□□ -1.47
RGD1YBR260C PGM1P33401 570 aaKnown RBP5.9□□□□□ -1.47
RGD1YBR260C FLO10P36170 1169 aa5.9□□□□□ -1.47
RGD1YBR260C ALG14P38242 237 aa5.9□□□□□ -1.47
RGD1YBR260C NEM1P38757 446 aa5.9□□□□□ -1.47
RGD1YBR260C QNS1P38795 714 aaKnown RBP5.9□□□□□ -1.47
RGD1YBR260C RTC3P38804 111 aaPredicted RBP5.9□□□□□ -1.47
RGD1YBR260C RPL10P41805 221 aaKnown RBP5.9□□□□□ -1.47
RGD1YBR260C ERR3P42222 437 aa5.9□□□□□ -1.47
RGD1YBR260C NUP85P46673 744 aa5.9□□□□□ -1.47
RGD1YBR260C DOC1P53068 250 aa5.9□□□□□ -1.47
RGD1YBR260C YDR131CQ03899 556 aa5.9□□□□□ -1.47
RGD1YBR260C YPR091CQ06833 770 aa5.9□□□□□ -1.47
RGD1YBR260C AEP3Q12089 606 aa5.9□□□□□ -1.47
RGD1YBR260C YOR022CQ12204 715 aa5.9□□□□□ -1.47
RGD1YBR260C YDL199CQ12407 687 aa5.9□□□□□ -1.47
RGD1YBR260C SUS1Q6WNK7 96 aa5.9□□□□□ -1.47
RGD1YBR260C SRD1P09007 221 aa5.89□□□□□ -1.47
RGD1YBR260C CDC42P19073 191 aa5.89□□□□□ -1.47
RGD1YBR260C DBR1P24309 405 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C MGR1P25573 417 aa5.89□□□□□ -1.47
RGD1YBR260C YCL068CP25593 260 aa5.89□□□□□ -1.47
RGD1YBR260C SRB6P32570 121 aa5.89□□□□□ -1.47
RGD1YBR260C PDC2P32896 925 aa5.89□□□□□ -1.47
RGD1YBR260C LHP1P33399 275 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C KAE1P36132 386 aa5.89□□□□□ -1.47
RGD1YBR260C AZR1P50080 613 aa5.89□□□□□ -1.47
RGD1YBR260C PUS2P53167 370 aa5.89□□□□□ -1.47
RGD1YBR260C RRN9P53437 365 aa5.89□□□□□ -1.47
RGD1YBR260C RPT4P53549 437 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C OCA2P53949 197 aa5.89□□□□□ -1.47
RGD1YBR260C SIW14P53965 281 aa5.89□□□□□ -1.47
RGD1YBR260C PRP38Q00723 242 aaPredicted RBP5.89□□□□□ -1.47
RGD1YBR260C YPL113CQ02961 396 aa5.89□□□□□ -1.47
RGD1YBR260C GAS3Q03655 524 aa5.89□□□□□ -1.47
RGD1YBR260C NHX1Q04121 633 aa5.89□□□□□ -1.47
RGD1YBR260C FMP25Q08023 583 aa5.89□□□□□ -1.47
RGD1YBR260C YPR063CQ12160 140 aa5.89□□□□□ -1.47
RGD1YBR260C YPL247CQ12523 523 aa5.89□□□□□ -1.47
RGD1YBR260C MTR10Q99189 972 aa5.89□□□□□ -1.47
RGD1YBR260C CYC1P00044 109 aaPredicted RBP5.89□□□□□ -1.47
RGD1YBR260C CIT2P08679 460 aa5.89□□□□□ -1.47
RGD1YBR260C MAS1P10507 462 aa5.89□□□□□ -1.47
RGD1YBR260C SAM2P19358 384 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C PHO80P20052 293 aa5.89□□□□□ -1.47
RGD1YBR260C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
RGD1YBR260C IFM1P25038 676 aa5.89□□□□□ -1.47
RGD1YBR260C UTR2P32623 467 aa5.89□□□□□ -1.47
RGD1YBR260C SRP102P36057 244 aaPredicted RBP5.89□□□□□ -1.47
RGD1YBR260C CHK1P38147 527 aa5.89□□□□□ -1.47
RGD1YBR260C PAN5P38787 379 aa5.89□□□□□ -1.47
RGD1YBR260C YHR182WP38870 785 aa5.89□□□□□ -1.47
RGD1YBR260C MNN1P39106 762 aa5.89□□□□□ -1.47
RGD1YBR260C RMD6P39975 231 aa5.89□□□□□ -1.47
RGD1YBR260C HPA3P39979 161 aa5.89□□□□□ -1.47
RGD1YBR260C ICP55P40051 511 aa5.89□□□□□ -1.47
RGD1YBR260C SLM1P40485 686 aa5.89□□□□□ -1.47
RGD1YBR260C YJL218WP40892 196 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C ASG7P46993 209 aa5.89□□□□□ -1.47
RGD1YBR260C SNN1P48232 102 aa5.89□□□□□ -1.47
RGD1YBR260C ARH1P48360 493 aa5.89□□□□□ -1.47
RGD1YBR260C NQM1P53228 333 aaPredicted RBP5.89□□□□□ -1.47
RGD1YBR260C VPS62P53285 467 aa5.89□□□□□ -1.47
RGD1YBR260C ALG11P53954 548 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C CDC55Q00362 526 aa5.89□□□□□ -1.47
RGD1YBR260C SRP1Q02821 542 aaKnown RBP5.89□□□□□ -1.47
RGD1YBR260C TPP1Q03796 238 aa5.89□□□□□ -1.47
RGD1YBR260C YLR108CQ12259 485 aa5.89□□□□□ -1.47
RGD1YBR260C SLH1P53327 1967 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C SCEIP03882 235 aa5.88□□□□□ -1.47
RGD1YBR260C RPL25P04456 142 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C MIS1P09440 975 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C HSP26P15992 214 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
RGD1YBR260C SIR1P21691 654 aa5.88□□□□□ -1.47
RGD1YBR260C YCR102CP25608 368 aa5.88□□□□□ -1.47
RGD1YBR260C RSC6P25632 483 aa5.88□□□□□ -1.47
RGD1YBR260C MRPL36P36531 177 aa5.88□□□□□ -1.47
RGD1YBR260C NOP4P37838 685 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C MBA1P38300 278 aa5.88□□□□□ -1.47
RGD1YBR260C YBR238CP38330 731 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C MAF1P41910 395 aa5.88□□□□□ -1.47
RGD1YBR260C YJR030CP47101 745 aa5.88□□□□□ -1.47
RGD1YBR260C MCM22P47167 239 aa5.88□□□□□ -1.47
RGD1YBR260C LYS20P48570 428 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C PBP1P53297 722 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C SLM2P53955 656 aa5.88□□□□□ -1.47
RGD1YBR260C YCL001W-AP87012 153 aa5.88□□□□□ -1.47
RGD1YBR260C NAM8Q00539 523 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C SEN15Q04675 128 aa5.88□□□□□ -1.47
RGD1YBR260C CDC123Q05791 360 aa5.88□□□□□ -1.47
RGD1YBR260C YLR326WQ06170 240 aaKnown RBP5.88□□□□□ -1.47
RGD1YBR260C CRN1Q06440 651 aa5.88□□□□□ -1.47
RGD1YBR260C GUP2Q08929 609 aa5.88□□□□□ -1.47
RGD1YBR260C PNS1Q12412 539 aa5.88□□□□□ -1.47
RGD1YBR260C YKL018C-AQ3E7A7 99 aa5.88□□□□□ -1.47
RGD1YBR260C ECM3Q99252 613 aa5.88□□□□□ -1.47
RGD1YBR260C AI4P03878 556 aa5.87□□□□□ -1.47
RGD1YBR260C MET2P08465 486 aa5.87□□□□□ -1.47
RGD1YBR260C ERG20P08524 352 aaKnown RBP5.87□□□□□ -1.47
RGD1YBR260C HOP09932 586 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms