RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YLR125WQ12138 136 aa6.61□□□□□ -1.35
TDP1YBR223C NSI1Q12457 570 aa6.61□□□□□ -1.35
TDP1YBR223C YPR096CO13587 100 aa6.61□□□□□ -1.35
TDP1YBR223C FUM1P08417 488 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C NFT1P0CE68 1218 aa6.61□□□□□ -1.35
TDP1YBR223C TRX3P25372 127 aa6.61□□□□□ -1.35
TDP1YBR223C SYP1P25623 870 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C IDH2P28241 369 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C GMH1P36125 273 aa6.61□□□□□ -1.35
TDP1YBR223C CBP4P37267 147 aa6.61□□□□□ -1.35
TDP1YBR223C YHR112CP38716 378 aa6.61□□□□□ -1.35
TDP1YBR223C ISC1P40015 477 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C NDE1P40215 560 aa6.61□□□□□ -1.35
TDP1YBR223C SSU1P41930 458 aa6.61□□□□□ -1.35
TDP1YBR223C PFA3P42836 336 aa6.61□□□□□ -1.35
TDP1YBR223C YFR018CP43599 363 aa6.61□□□□□ -1.35
TDP1YBR223C YJL043WP47053 257 aa6.61□□□□□ -1.35
TDP1YBR223C RAI1P53063 387 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C COG7P53195 279 aa6.61□□□□□ -1.35
TDP1YBR223C RTS3P53289 263 aa6.61□□□□□ -1.35
TDP1YBR223C AAT1Q01802 451 aa6.61□□□□□ -1.35
TDP1YBR223C PEX10Q05568 337 aa6.61□□□□□ -1.35
TDP1YBR223C SPO77Q06134 477 aa6.61□□□□□ -1.35
TDP1YBR223C TSR2Q06672 205 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C BRE4Q07660 1125 aa6.61□□□□□ -1.35
TDP1YBR223C YLR036CQ07986 203 aa6.61□□□□□ -1.35
TDP1YBR223C NGL1Q08213 363 aaKnown RBP6.61□□□□□ -1.35
TDP1YBR223C TRM8Q12009 286 aa6.61□□□□□ -1.35
TDP1YBR223C REV1P12689 985 aa6.6□□□□□ -1.35
TDP1YBR223C MER1P16523 270 aa6.6□□□□□ -1.35
TDP1YBR223C GIT1P25346 518 aa6.6□□□□□ -1.35
TDP1YBR223C PMT1P33775 817 aa6.6□□□□□ -1.35
TDP1YBR223C EMC3P36039 253 aa6.6□□□□□ -1.35
TDP1YBR223C RCN1P36054 211 aa6.6□□□□□ -1.35
TDP1YBR223C SEA4P38164 1038 aa6.6□□□□□ -1.35
TDP1YBR223C MAP2P38174 421 aaKnown RBP6.6□□□□□ -1.35
TDP1YBR223C MUM2P38236 366 aa6.6□□□□□ -1.35
TDP1YBR223C IML3P38265 245 aa6.6□□□□□ -1.35
TDP1YBR223C YHR033WP38690 423 aa6.6□□□□□ -1.35
TDP1YBR223C ALR2P43553 858 aa6.6□□□□□ -1.35
TDP1YBR223C HOC1P47124 396 aa6.6□□□□□ -1.35
TDP1YBR223C CWC23P52868 283 aaPredicted RBP6.6□□□□□ -1.35
TDP1YBR223C YNR065CP53751 1116 aa6.6□□□□□ -1.35
TDP1YBR223C MAK3Q03503 176 aa6.6□□□□□ -1.35
TDP1YBR223C SWF1Q04629 336 aa6.6□□□□□ -1.35
TDP1YBR223C TSC13Q99190 310 aa6.6□□□□□ -1.35
TDP1YBR223C LAT1P12695 482 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C IDP1P21954 428 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C PHO84P25297 587 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C YCL049CP25577 312 aa6.59□□□□□ -1.35
TDP1YBR223C RFA2P26754 273 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C GPX2P38143 162 aa6.59□□□□□ -1.35
TDP1YBR223C GIM4P40005 111 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C ERG10P41338 398 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C RET2P43621 546 aa6.59□□□□□ -1.35
TDP1YBR223C GCV1P48015 400 aa6.59□□□□□ -1.35
TDP1YBR223C IMD4P50094 524 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C ZRG17P53735 605 aa6.59□□□□□ -1.35
TDP1YBR223C RRP45Q05636 305 aaKnown RBP6.59□□□□□ -1.35
TDP1YBR223C SGO1Q08490 590 aa6.59□□□□□ -1.35
TDP1YBR223C UIP4Q08926 304 aa6.59□□□□□ -1.35
TDP1YBR223C SFM1Q12314 213 aa6.59□□□□□ -1.35
TDP1YBR223C PNS1Q12412 539 aa6.59□□□□□ -1.35
TDP1YBR223C SAM35P14693 329 aa6.58□□□□□ -1.36
TDP1YBR223C DBP3P20447 523 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C KIN3P22209 435 aa6.58□□□□□ -1.36
TDP1YBR223C SLM5P25345 492 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C YJU3P28321 313 aa6.58□□□□□ -1.36
TDP1YBR223C GSH1P32477 678 aa6.58□□□□□ -1.36
TDP1YBR223C SSO1P32867 290 aa6.58□□□□□ -1.36
TDP1YBR223C DSF2P38213 736 aa6.58□□□□□ -1.36
TDP1YBR223C EXO84P38261 753 aa6.58□□□□□ -1.36
TDP1YBR223C YPT35P38815 214 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C YHR219WP38900 624 aa6.58□□□□□ -1.36
TDP1YBR223C FCY21P40039 528 aa6.58□□□□□ -1.36
TDP1YBR223C PRE6P40303 254 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C YGR201CP42936 225 aa6.58□□□□□ -1.36
TDP1YBR223C SSY5P47002 699 aa6.58□□□□□ -1.36
TDP1YBR223C MSE1P48525 536 aa6.58□□□□□ -1.36
TDP1YBR223C BIO3P50277 480 aa6.58□□□□□ -1.36
TDP1YBR223C FLC3P53121 802 aa6.58□□□□□ -1.36
TDP1YBR223C KXD1P53158 218 aa6.58□□□□□ -1.36
TDP1YBR223C OAZ1Q02803 292 aa6.58□□□□□ -1.36
TDP1YBR223C RKM1Q08961 583 aaPredicted RBP6.58□□□□□ -1.36
TDP1YBR223C SAM4Q08985 325 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C TY2A-LR1P0C2J4 438 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-FP0CX61 438 aa6.58□□□□□ -1.36
TDP1YBR223C TY2A-GR2P0CX62 438 aa6.58□□□□□ -1.36
TDP1YBR223C RPS1BP23248 255 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C RRP7P25368 297 aaPredicted RBP6.58□□□□□ -1.36
TDP1YBR223C TY2A-CP25383 438 aa6.58□□□□□ -1.36
TDP1YBR223C ARO7P32178 256 aa6.58□□□□□ -1.36
TDP1YBR223C STE5P32917 917 aa6.58□□□□□ -1.36
TDP1YBR223C LHP1P33399 275 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C MAC1P35192 417 aa6.58□□□□□ -1.36
TDP1YBR223C ZTA1P38230 334 aaKnown RBP6.58□□□□□ -1.36
TDP1YBR223C STP2P38704 541 aa6.58□□□□□ -1.36
TDP1YBR223C PEX28P38848 579 aa6.58□□□□□ -1.36
TDP1YBR223C CEM1P39525 442 aa6.58□□□□□ -1.36
TDP1YBR223C RRG9P40156 214 aa6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms