RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W KKQ8P36004 724 aa2.81□□□□□ -1.96
SWD3YBR175W YKT6P36015 200 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W YKL023WP36103 277 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W YMC2P38087 329 aa2.81□□□□□ -1.96
SWD3YBR175W YBL028CP38202 106 aa2.81□□□□□ -1.96
SWD3YBR175W QDR3P38227 689 aa2.81□□□□□ -1.96
SWD3YBR175W GAT2P40209 560 aa2.81□□□□□ -1.96
SWD3YBR175W LYS20P48570 428 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W RIB4P50861 169 aaPredicted RBP2.81□□□□□ -1.96
SWD3YBR175W DRN1P53255 507 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W RTT102P53330 157 aa2.81□□□□□ -1.96
SWD3YBR175W YVH1Q02256 364 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W INP2Q03824 705 aa2.81□□□□□ -1.96
SWD3YBR175W CAB5Q03941 241 aa2.81□□□□□ -1.96
SWD3YBR175W ERV41Q04651 352 aa2.81□□□□□ -1.96
SWD3YBR175W YMR310CQ04867 317 aaPredicted RBP2.81□□□□□ -1.96
SWD3YBR175W ATG38Q05789 226 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W RRG8Q06109 277 aa2.81□□□□□ -1.96
SWD3YBR175W VAC14Q06708 880 aa2.81□□□□□ -1.96
SWD3YBR175W NSE1Q07913 336 aa2.81□□□□□ -1.96
SWD3YBR175W PEX27Q08580 376 aa2.81□□□□□ -1.96
SWD3YBR175W YOR365CQ08844 703 aa2.81□□□□□ -1.96
SWD3YBR175W YOR389WQ08912 624 aa2.81□□□□□ -1.96
SWD3YBR175W RPL7BQ12213 244 aaKnown RBP2.81□□□□□ -1.96
SWD3YBR175W RUP1Q12242 671 aa2.81□□□□□ -1.96
SWD3YBR175W RBD2Q12270 262 aa2.81□□□□□ -1.96
SWD3YBR175W SUT2Q12286 268 aa2.81□□□□□ -1.96
SWD3YBR175W ADF1Q2V2Q1 113 aa2.81□□□□□ -1.96
SWD3YBR175W BRR1Q99177 341 aaPredicted RBP2.81□□□□□ -1.96
SWD3YBR175W YPR089WO13585 888 aa2.8□□□□□ -1.96
SWD3YBR175W RAD52P06778 471 aaKnown RBP2.8□□□□□ -1.96
SWD3YBR175W CDC21P06785 304 aa2.8□□□□□ -1.96
SWD3YBR175W MAS1P10507 462 aa2.8□□□□□ -1.96
SWD3YBR175W SNF3P10870 884 aa2.8□□□□□ -1.96
SWD3YBR175W MER1P16523 270 aa2.8□□□□□ -1.96
SWD3YBR175W CDC42P19073 191 aa2.8□□□□□ -1.96
SWD3YBR175W TYR1P20049 452 aa2.8□□□□□ -1.96
SWD3YBR175W MRPL25P23369 157 aa2.8□□□□□ -1.96
SWD3YBR175W HXT2P23585 541 aa2.8□□□□□ -1.96
SWD3YBR175W MGR1P25573 417 aa2.8□□□□□ -1.96
SWD3YBR175W DPH5P32469 300 aaPredicted RBP2.8□□□□□ -1.96
SWD3YBR175W DOA4P32571 926 aa2.8□□□□□ -1.96
SWD3YBR175W EMP70P32802 667 aa2.8□□□□□ -1.96
SWD3YBR175W REC114P32841 428 aa2.8□□□□□ -1.96
SWD3YBR175W PEX32P38292 413 aa2.8□□□□□ -1.96
SWD3YBR175W STP2P38704 541 aa2.8□□□□□ -1.96
SWD3YBR175W INM1P38710 295 aa2.8□□□□□ -1.96
SWD3YBR175W UBA4P38820 440 aa2.8□□□□□ -1.96
SWD3YBR175W YHR177WP38867 453 aa2.8□□□□□ -1.96
SWD3YBR175W ALP1P38971 573 aa2.8□□□□□ -1.96
SWD3YBR175W CCT2P39076 527 aaKnown RBP2.8□□□□□ -1.96
SWD3YBR175W ERV46P39727 415 aa2.8□□□□□ -1.96
SWD3YBR175W SCC4P40090 624 aa2.8□□□□□ -1.96
SWD3YBR175W ATM1P40416 690 aa2.8□□□□□ -1.96
SWD3YBR175W SYG1P40528 902 aa2.8□□□□□ -1.96
SWD3YBR175W PAC11P40960 533 aa2.8□□□□□ -1.96
SWD3YBR175W POP1P41812 875 aa2.8□□□□□ -1.96
SWD3YBR175W PHO86P46956 311 aa2.8□□□□□ -1.96
SWD3YBR175W ASN1P49089 572 aaKnown RBP2.8□□□□□ -1.96
SWD3YBR175W VOA1P53262 265 aa2.8□□□□□ -1.96
SWD3YBR175W BUD32P53323 261 aa2.8□□□□□ -1.96
SWD3YBR175W YNL146WP53906 100 aa2.8□□□□□ -1.96
SWD3YBR175W SNU56Q03782 492 aaKnown RBP2.8□□□□□ -1.96
SWD3YBR175W BOP2Q06150 570 aa2.8□□□□□ -1.96
SWD3YBR175W YLR173WQ06247 608 aa2.8□□□□□ -1.96
SWD3YBR175W YLL007CQ07799 665 aa2.8□□□□□ -1.96
SWD3YBR175W RDR1Q08904 546 aa2.8□□□□□ -1.96
SWD3YBR175W PKH2Q12236 1081 aaKnown RBP2.8□□□□□ -1.96
SWD3YBR175W SPO24Q3E752 67 aa2.8□□□□□ -1.96
SWD3YBR175W NUM1Q00402 2748 aa2.79□□□□□ -1.96
SWD3YBR175W PDR15Q04182 1529 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W MES1P00958 751 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W RSR1P13856 272 aa2.79□□□□□ -1.96
SWD3YBR175W PMA2P19657 947 aa2.79□□□□□ -1.96
SWD3YBR175W RPB4P20433 221 aaPredicted RBP2.79□□□□□ -1.96
SWD3YBR175W MEK1P24719 497 aaPredicted RBP2.79□□□□□ -1.96
SWD3YBR175W YCR006CP25350 157 aa2.79□□□□□ -1.96
SWD3YBR175W ADY2P25613 283 aa2.79□□□□□ -1.96
SWD3YBR175W RGT1P32862 1170 aa2.79□□□□□ -1.96
SWD3YBR175W MSN4P33749 630 aa2.79□□□□□ -1.96
SWD3YBR175W PAD1P33751 242 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SWD3YBR175W CBP4P37267 147 aa2.79□□□□□ -1.96
SWD3YBR175W ROT2P38138 954 aa2.79□□□□□ -1.96
SWD3YBR175W RTT107P38850 1070 aa2.79□□□□□ -1.96
SWD3YBR175W YMR124WP39523 943 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W YEL020CP39994 560 aa2.79□□□□□ -1.96
SWD3YBR175W SAS2P40963 338 aa2.79□□□□□ -1.96
SWD3YBR175W SPG5P42933 373 aa2.79□□□□□ -1.96
SWD3YBR175W GCN20P43535 752 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W TOS3P43637 560 aa2.79□□□□□ -1.96
SWD3YBR175W BNA3P47039 444 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W YJR011CP47086 261 aaPredicted RBP2.79□□□□□ -1.96
SWD3YBR175W SMM1P53720 384 aaKnown RBP2.79□□□□□ -1.96
SWD3YBR175W YNL050CP53952 270 aa2.79□□□□□ -1.96
SWD3YBR175W YMR102CQ03177 834 aa2.79□□□□□ -1.96
SWD3YBR175W HSP31Q04432 237 aa2.79□□□□□ -1.96
SWD3YBR175W PDR8Q06149 701 aa2.79□□□□□ -1.96
SWD3YBR175W ARR1Q06596 294 aa2.79□□□□□ -1.96
SWD3YBR175W MRPL35Q06678 367 aa2.79□□□□□ -1.96
SWD3YBR175W YOL107WQ12239 342 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms