RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 AIFM3Q96NN9 605 aa5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 ELF4Q99607 663 aaPredicted RBP5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 METTL22Q9BUU2 404 aaPredicted RBP5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 PRDM11Q9NQV5 511 aa5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 CHST12Q9NRB3 414 aa5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 TOPORSQ9NS56 1045 aaPredicted RBP5.41□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 KRT37O76014 449 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 ESR1P03372 595 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 GNAT1P11488 350 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 TRIM27P14373 513 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 KRT15P19012 456 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 VCAM1P19320 739 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 SLC9A1P19634 815 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 LPOP22079 712 aaPredicted RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 SCAND1P57086 179 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 OS9Q13438 667 aaPredicted RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 GTF2H3Q13889 308 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 ZNF174Q15697 407 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 VPS72Q15906 364 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 CPSF6Q16630 551 aaKnown RBP eCLIP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 MINDY4Q4G0A6 757 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 SYCP2LQ5T4T6 812 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 ANGEL2Q5VTE6 544 aaKnown RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 HLA-DQA1Q5Y7H0 255 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PPP4R4Q6NUP7 873 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 CEP68Q76N32 757 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 EPM2AIP1Q7L775 607 aaPredicted RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PTRH1Q86Y79 214 aaKnown RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 CREG2Q8IUH2 290 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 NOSTRINQ8IVI9 506 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 USP33Q8TEY7 942 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 LMBR1Q8WVP7 490 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 ZDHHC5Q9C0B5 715 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 EPB41L1Q9H4G0 881 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA9Q9Y5G4 932 aaKnown RBP5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA8Q9Y5G5 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA7Q9Y5G6 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA3Q9Y5H0 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PCDHGA2Q9Y5H1 932 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 SNX11Q9Y5W9 270 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 X6R8D5 127 aa5.4□□□□□ -1.54
AC004542.1-201ENST00000602955 PITPNM2Q9BZ72 1349 aa5.4□□□□□ -1.55
AC004542.1-201ENST00000602955 TCRBV5S4A2TA0A5A2 114 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 KLHL33A6NCF5 533 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 MAN2B1O00754 1011 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ERC2O15083 957 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 RPL10P27635 214 aaKnown RBP5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 GPR3P46089 330 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 EGR3Q06889 387 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 GBX1Q14549 363 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ODF1Q14990 250 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 FIGNQ5HY92 759 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 FSTL4Q6MZW2 842 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 OTOP3Q7RTS5 596 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 WAPLQ7Z5K2 1190 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 RIOX2Q8IUF8 465 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 AMOTL1Q8IY63 956 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 DLG3Q92796 817 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 CLIP3Q96DZ5 547 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 HSPBAP1Q96EW2 488 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 TRMT2BQ96GJ1 504 aaKnown RBP5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ORAI2Q96SN7 254 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 DBNDD2Q9BQY9 259 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 PCIF1Q9H4Z3 704 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ZMAT4Q9H898 229 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ACSS2Q9NR19 701 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 TOMM22Q9NS69 142 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 TNFRSF10DQ9UBN6 386 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 ZBTB21Q9ULJ3 1066 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 B3GALT1Q9Y5Z6 326 aa5.39□□□□□ -1.55
AC004542.1-201ENST00000602955 TMEM265A0A087WTH1 108 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 GOLGA8AA7E2F4 631 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 GOLGA8BA8MQT2 603 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 KDM1AO60341 852 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 HIP1RO75146 1068 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 H2AFYO75367 372 aaKnown RBP5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 DGKIO75912 1065 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 CYP17A1P05093 508 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 COL6A2P12110 1019 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 FPR2P25090 351 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 CHRNA4P43681 627 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 NFIAQ12857 509 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 BRD3Q15059 726 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 IFI16Q16666 785 aaKnown RBP5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 PRR23CQ6ZRP0 262 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 FRMD7Q6ZUT3 714 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 CD163Q86VB7 1156 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 ZZZ3Q8IYH5 903 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 NETO1Q8TDF5 533 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 SH3RF2Q8TEC5 729 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 MPHOSPH6Q99547 160 aaKnown RBP5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 MTA3Q9BTC8 594 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 SARGQ9BW04 601 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 MS4A5Q9H3V2 200 aa5.38□□□□□ -1.55
AC004542.1-201ENST00000602955 ATP13A1Q9HD20 1204 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms