RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 EDNRBP24530 442 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 KCNQ1P51787 676 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 HAND2P61296 217 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 RPS6P62753 249 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 ALX1Q15699 326 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 TMEM67Q5HYA8 995 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 KRT40Q6A162 431 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 ZNF589Q86UQ0 364 aaPredicted RBP9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 EVI5LQ96CN4 794 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 SLC9A7Q96T83 725 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 CPVLQ9H3G5 476 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 AAASQ9NRG9 546 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 HELLSQ9NRZ9 838 aa9.15□□□□□ -0.94
SMCHD1-210ENST00000583800 BRWD1Q9NSI6 2320 aa9.15□□□□□ -0.95
SMCHD1-210ENST00000583800 WDR19Q8NEZ3 1342 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 TRANK1O15050 2925 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 CARNS1A5YM72 827 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 RCCD1A6NED2 376 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 RBAK-RBAKDNI3L0D1 243 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 NKRFO15226 690 aaKnown RBP eCLIP9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 ST8SIA5O15466 376 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 FGAP02671 866 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 IQCF3P0C7M6 154 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 GOLGA8HP0CJ92 632 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 TXNP10599 105 aaKnown RBP9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 HSPD1P10809 573 aaKnown RBP9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 ACTN1P12814 892 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 CHMP4BP1P59074 171 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 ZNF543Q08ER8 600 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 USH1GQ495M9 461 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 MCMDC2Q4G0Z9 681 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 BRDTQ58F21 947 aaPredicted RBP9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 ANKRD45Q5TZF3 282 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 NFRKBQ6P4R8 1299 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 SPRED2Q7Z698 418 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 TBC1D10CQ8IV04 446 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 SCFD2Q8WU76 684 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 TCP11L1Q9NUJ3 509 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 MTCH2Q9Y6C9 303 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 MICAL3Q7RTP6 2002 aa9.14□□□□□ -0.95
SMCHD1-210ENST00000583800 XIRP2A4UGR9 3374 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 ZMYM6O95789 1325 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 NEDD4P46934 1319 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 LILRB3O75022 631 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 SNHG28P0DPA3 235 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 BMP1P13497 986 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 RFC2P35250 354 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 PDE1AP54750 535 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 NMIQ13287 307 aaPredicted RBP9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 HERC6Q8IVU3 1022 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 DNERQ8NFT8 737 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 ARNTL2Q8WYA1 636 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 ZKSCAN3Q9BRR0 538 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 FTOQ9C0B1 505 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 UBA5Q9GZZ9 404 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 VRTNQ9H8Y1 702 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 BDP1A6H8Y1 2624 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 DOCK5Q9H7D0 1870 aa9.13□□□□□ -0.95
SMCHD1-210ENST00000583800 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 MMP3P08254 477 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 TAP1Q03518 808 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 BFSP2Q13515 415 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 CDC37Q16543 378 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 PTGISQ16647 500 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 MFSD6Q6ZSS7 791 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 TMCO2Q7Z6W1 182 aaPredicted RBP9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 PHOSPHO2Q8TCD6 241 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 AFG1LQ8WV93 481 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 TBC1D5Q92609 795 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 DHX38Q92620 1227 aaKnown RBP9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 CTAGE1Q96RT6 745 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 COL20A1Q9P218 1284 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 PNMA2Q9UL42 364 aa9.12□□□□□ -0.95
SMCHD1-210ENST00000583800 NLRC5Q86WI3 1866 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 LCHNA4D1U4 455 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 KIF28PB7ZC32 967 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 KPNA6O60684 536 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 AP1G2O75843 785 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 BAIAP3O94812 1187 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 POU3F3P20264 500 aaPredicted RBP9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 KCNJ6P48051 423 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 WDR5P61964 334 aaKnown RBP9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 DEFB103AP81534 67 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 ARHGAP1Q07960 439 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 GRB10Q13322 594 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 GPNMBQ14956 572 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 LY6KQ17RY6 165 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 AAK1Q2M2I8 961 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 GPATCH4Q5T3I0 446 aaKnown RBP9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 GDF6Q6KF10 455 aaPredicted RBP9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 CCDC62Q6P9F0 684 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 SEPT14Q6ZU15 432 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 GDPD5Q8WTR4 605 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 KAT2BQ92831 832 aa9.11□□□□□ -0.95
SMCHD1-210ENST00000583800 TTC14Q96N46 770 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms