RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 MYH7BA7E2Y1 1941 aa9.93□□□□□ -0.82
CASC3-206ENST00000579238 PALM3A6NDB9 673 aaPredicted RBP9.92□□□□□ -0.82
CASC3-206ENST00000579238 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 TREHO43280 583 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 LGALS2P05162 132 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 SMIM10L2AP0DMW4 78 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 SMIM10L2BP0DMW5 78 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 GNAT1P11488 350 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 IL9P15248 144 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 AAMPQ13685 434 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 PTCRAQ6ISU1 281 aaPredicted RBP9.92□□□□□ -0.82
CASC3-206ENST00000579238 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 CHD1LQ86WJ1 897 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 NEK9Q8TD19 979 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 TOP1MTQ969P6 601 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 YME1L1Q96TA2 773 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
CASC3-206ENST00000579238 MICAL3Q7RTP6 2002 aa9.92□□□□□ -0.82
CASC3-206ENST00000579238 PRR33A8MZF0 331 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 H3BNC9 293 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 RBAK-RBAKDNI3L0D1 243 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 NOP56O00567 594 aaKnown RBP9.91□□□□□ -0.82
CASC3-206ENST00000579238 STAM2O75886 525 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 ALADP13716 330 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 SSTR3P32745 418 aaPredicted RBP9.91□□□□□ -0.82
CASC3-206ENST00000579238 ICAM3P32942 547 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 NUCB1Q02818 461 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 GPM6BQ13491 265 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 GNPTABQ3T906 1256 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 METTL7BQ6UX53 244 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 FCHSD1Q86WN1 690 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 TMEM192Q8IY95 271 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 APBB2Q92870 758 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 GPKOWQ92917 476 aaPredicted RBP eCLIP9.91□□□□□ -0.82
CASC3-206ENST00000579238 PABPC5Q96DU9 382 aaKnown RBP9.91□□□□□ -0.82
CASC3-206ENST00000579238 USP26Q9BXU7 913 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 RNPEPQ9H4A4 650 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 RIOX1Q9H6W3 641 aa9.91□□□□□ -0.82
CASC3-206ENST00000579238 COL4A6Q14031 1691 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 FRMPD4Q14CM0 1322 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 UPP2O95045 317 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 CTSHP09668 335 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 MRPS9P82933 396 aaKnown RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 TRDNQ13061 729 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 NEDD9Q14511 834 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 GRM4Q14833 912 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 COL19A1Q14993 1142 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 TCEAL5Q5H9L2 206 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 CYB5R4Q7L1T6 521 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 ZFP91Q96JP5 570 aaPredicted RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 INPP4AQ96PE3 977 aaPredicted RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 PIGSQ96S52 555 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 GPR20Q99678 358 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 OSBPL7Q9BZF2 842 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 NSUN3Q9H649 340 aaKnown RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 BCAS3Q9H6U6 928 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 ZNF215Q9UL58 517 aaPredicted RBP9.9□□□□□ -0.82
CASC3-206ENST00000579238 FAM50BQ9Y247 325 aa9.9□□□□□ -0.82
CASC3-206ENST00000579238 SPATA31C2B4DYI2 1134 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 H3BQ06 376 aaPredicted RBP9.89□□□□□ -0.83
CASC3-206ENST00000579238 FIBPO43427 364 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 NCK2O43639 380 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 CYTH3O43739 400 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 ADAM17P78536 824 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 SEMA3FQ13275 785 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 FAM26DQ5JW98 314 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 CYFIP1Q7L576 1253 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 IFIH1Q9BYX4 1025 aaKnown RBP9.89□□□□□ -0.83
CASC3-206ENST00000579238 SETD4Q9NVD3 440 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 PRKAG3Q9UGI9 489 aa9.89□□□□□ -0.83
CASC3-206ENST00000579238 POTEB3A0JP26 581 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 ERICH2A1L162 156 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 C5orf67F2Z3F1 127 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 IFIT3O14879 490 aaKnown RBP9.88□□□□□ -0.83
CASC3-206ENST00000579238 DCXO43602 365 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 IGHDP01880 384 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 RB1P06400 928 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 ARHGAP4P98171 946 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 ZP2Q05996 745 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 TROAPQ12815 778 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 CSPP1Q1MSJ5 1256 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 UTP14CQ5TAP6 766 aaKnown RBP9.88□□□□□ -0.83
CASC3-206ENST00000579238 POTEBQ6S5H4 581 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 RPAINQ86UA6 219 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 TRIM50Q86XT4 487 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 FIBCD1Q8N539 461 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 LMBR1Q8WVP7 490 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 IL17RAQ96F46 866 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 SENP7Q9BQF6 1050 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 LMAN2LQ9H0V9 348 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 IL25Q9H293 177 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 RTEL1Q9NZ71 1219 aa9.88□□□□□ -0.83
CASC3-206ENST00000579238 U3KPZ7 1027 aaPredicted RBP9.88□□□□□ -0.83
CASC3-206ENST00000579238 NRCAMQ92823 1304 aa9.87□□□□□ -0.83
CASC3-206ENST00000579238 BAZ2BQ9UIF8 2168 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms