RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 TTC3P53804 2025 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 PLXNA4Q9HCM2 1894 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 C17orf102A2RUQ5 167 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 CYTH3O43739 400 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 PPFIA4O75335 1185 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 PARNO95453 639 aaKnown RBP14□□□□□ -0.17
CAPN3-220ENST00000569827 AMHP03971 560 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 CCND2P30279 289 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 NUCB1Q02818 461 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 SEMA3FQ13275 785 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 PLEKHG4Q58EX7 1191 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 UTP14CQ5TAP6 766 aaKnown RBP14□□□□□ -0.17
CAPN3-220ENST00000569827 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 SETD4Q9NVD3 440 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 RTEL1Q9NZ71 1219 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 LMCD1Q9NZU5 365 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 HCN4Q9Y3Q4 1203 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 INSL6Q9Y581 213 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 ZNF318Q5VUA4 2279 aa14□□□□□ -0.17
CAPN3-220ENST00000569827 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 H3BRB1 525 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 GCOM1H8Y6P7 765 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 EFCAB14O75071 495 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 POLR2MP0CAP2 368 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 SSTR3P32745 418 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 HTRA4P83105 476 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 GHRHRQ02643 423 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 GRM4Q14833 912 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 EPC2Q52LR7 807 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 PTCRAQ6ISU1 281 aaPredicted RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 CYFIP1Q7L576 1253 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 TICAM2Q86XR7 235 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 YME1L1Q96TA2 773 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
CAPN3-220ENST00000569827 WDR81Q562E7 1941 aa13.99□□□□□ -0.17
CAPN3-220ENST00000569827 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 NOP56O00567 594 aaKnown RBP13.98□□□□□ -0.17
CAPN3-220ENST00000569827 PTH1RQ03431 593 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 LEXMQ3ZCV2 418 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 FAM178BQ8IXR5 827 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 SP7Q8TDD2 431 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-220ENST00000569827 YTHDC1Q96MU7 727 aaKnown RBP13.98□□□□□ -0.17
CAPN3-220ENST00000569827 MAF1Q9H063 256 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 RWDD1Q9H446 243 aaPredicted RBP13.98□□□□□ -0.17
CAPN3-220ENST00000569827 CNNM2Q9H8M5 875 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 CTNNA3Q9UI47 895 aa13.98□□□□□ -0.17
CAPN3-220ENST00000569827 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
CAPN3-220ENST00000569827 GSPT1P15170 499 aaKnown RBP13.97□□□□□ -0.17
CAPN3-220ENST00000569827 PDE4AP27815 886 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 HOXC8P31273 242 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CAPN3-220ENST00000569827 GPM6BQ13491 265 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 GJD3Q8N144 294 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 SEPT8Q92599 483 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 MRPL38Q96DV4 380 aaKnown RBP13.97□□□□□ -0.17
CAPN3-220ENST00000569827 MYL10Q9BUA6 226 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 IFIH1Q9BYX4 1025 aaKnown RBP13.97□□□□□ -0.17
CAPN3-220ENST00000569827 RIOX1Q9H6W3 641 aa13.97□□□□□ -0.17
CAPN3-220ENST00000569827 MYH9P35579 1960 aaKnown RBP13.96□□□□□ -0.17
CAPN3-220ENST00000569827 FNDC1Q4ZHG4 1894 aaPredicted RBP13.96□□□□□ -0.17
CAPN3-220ENST00000569827 PI4K2BG5E9Z4 385 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 HIP1O00291 1037 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 GPR37L1O60883 481 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 CYP21A2P08686 494 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 ARHGAP4P98171 946 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 CLUL1Q15846 466 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 KCNV1Q6PIU1 500 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 USP17L6PQ6QN14 398 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 RUFY4Q6ZNE9 571 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 TMEM192Q8IY95 271 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 BANK1Q8NDB2 785 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 LMBR1Q8WVP7 490 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 ZBTB10Q96DT7 871 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 UIMC1Q96RL1 719 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 GPR20Q99678 358 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 PKD2L1Q9P0L9 805 aa13.96□□□□□ -0.17
CAPN3-220ENST00000569827 TECTAO75443 2155 aa13.96□□□□□ -0.18
CAPN3-220ENST00000569827 GRXCR2A6NFK2 248 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 GHRP10912 638 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 MARK3P27448 753 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 CTNNB1P35222 781 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 ANTXR2P58335 489 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 RAB11FIP4Q86YS3 637 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 CLDND1Q9NY35 253 aa13.95□□□□□ -0.18
CAPN3-220ENST00000569827 FRMPD4Q14CM0 1322 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 PNMA6FA0A0J9YX94 578 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 SPATA31C2B4DYI2 1134 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 H3BNC9 293 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 CHRNA1P02708 482 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 TGFB3P10600 412 aa13.94□□□□□ -0.18
CAPN3-220ENST00000569827 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms