RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PARP1P09874 1014 aaKnown RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 ZNF286BP0CG31 522 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 CKBP12277 381 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 SELPP16109 830 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 NCLP19338 710 aaKnown RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 COL9A1P20849 921 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 HOXC8P31273 242 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 PSEN2P49810 448 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 NT5C2P49902 561 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 CHMP4BP1P59074 171 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 GRB10Q13322 594 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 BFSP2Q13515 415 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 COL9A3Q14050 684 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 STXBP2Q15833 593 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 HSDL1Q3SXM5 330 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 BRDTQ58F21 947 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 ZNF618Q5T7W0 954 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 MYSM1Q5VVJ2 828 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 STOX1Q6ZVD7 989 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 LRRC8DQ7L1W4 858 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 CHST3Q7LGC8 479 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 IQCA1Q86XH1 822 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 FBXO11Q86XK2 927 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 SMAP1Q8IYB5 467 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 MICALL1Q8N3F8 863 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 TMEM87AQ8NBN3 555 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 RETREG2Q8NC44 543 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 PPTC7Q8NI37 304 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 CAGE1Q8TC20 777 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 AFAP1L1Q8TED9 768 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 ARNTL2Q8WYA1 636 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 ZFP91Q96JP5 570 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 UHRF1Q96T88 793 aaPredicted RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 PDCD2LQ9BRP1 358 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 C16orf70Q9BSU1 422 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 VAT1LQ9HCJ6 419 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 MRPL11Q9Y3B7 192 aaKnown RBP6.75□□□□□ -1.33
USP3-212ENST00000559276 TELO2Q9Y4R8 837 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 ATG2AQ2TAZ0 1938 aa6.75□□□□□ -1.33
USP3-212ENST00000559276 MICAL3Q7RTP6 2002 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 B4DLN1 442 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 KLRF2D3W0D1 207 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 ZBTB5O15062 677 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 TLL1O43897 1013 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 BRD1O95696 1058 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CFBP00751 764 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CYP21A2P08686 494 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 ACTN1P12814 892 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CASTP20810 708 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 HOXA13P31271 388 aaPredicted RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 MRPL12P52815 198 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 PTH1RQ03431 593 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 TROAPQ12815 778 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 SEMA3FQ13275 785 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 PTK7Q13308 1070 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 LAMC2Q13753 1193 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 MFSD10Q14728 455 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 PGM5Q15124 567 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 DGKDQ16760 1214 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 IMMTQ16891 758 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 KIAA0753Q2KHM9 967 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CCDC178Q5BJE1 867 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CELF3Q5SZQ8 465 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 ARHGEF16Q5VV41 709 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CNKSR3Q6P9H4 555 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP3-212ENST00000559276 VSIG10LQ86VR7 867 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 MCF2L2Q86YR7 1114 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 KHSRPQ92945 711 aaKnown RBP eCLIP6.74□□□□□ -1.334e-7■■■■□ 22.3
USP3-212ENST00000559276 MPHOSPH6Q99547 160 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 ALG1Q9BT22 464 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 AMNQ9BXJ7 453 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 FTOQ9C0B1 505 aaKnown RBP eCLIP6.74□□□□□ -1.33
USP3-212ENST00000559276 RBSNQ9H1K0 784 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 TSPY26PQ9H489 355 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 RIOX1Q9H6W3 641 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 SUGCTQ9HAC7 445 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 CD320Q9NPF0 282 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 DIAPH3Q9NSV4 1193 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 FRMPD4Q14CM0 1322 aa6.74□□□□□ -1.33
USP3-212ENST00000559276 BAZ2BQ9UIF8 2168 aaKnown RBP6.74□□□□□ -1.33
USP3-212ENST00000559276 LINC01553A4QN01 128 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 SORBS3O60504 671 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 PPFIA4O75335 1185 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 GJB5O95377 273 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 UBA1P22314 1058 aaKnown RBP6.73□□□□□ -1.33
USP3-212ENST00000559276 GTF2F1P35269 517 aaKnown RBP eCLIP6.73□□□□□ -1.33
USP3-212ENST00000559276 ANTXR2P58335 489 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 ERVK-21P61565 698 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 MRPS9P82933 396 aaKnown RBP6.73□□□□□ -1.33
USP3-212ENST00000559276 GRM4Q14833 912 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
USP3-212ENST00000559276 SERINC5Q86VE9 423 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 DHX37Q8IY37 1157 aaKnown RBP6.73□□□□□ -1.33
USP3-212ENST00000559276 C7orf31Q8N865 590 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 GPT2Q8TD30 523 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 GDPD5Q8WTR4 605 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 PIGSQ96S52 555 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 KRT23Q9C075 422 aa6.73□□□□□ -1.33
USP3-212ENST00000559276 EPHX3Q9H6B9 360 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms