RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 USP4Q13107 963 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PKP1Q13835 747 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 MUM1L1Q5H9M0 696 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 OTUD7BQ6GQQ9 843 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 SYNE3Q6ZMZ3 975 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 DEPDC4Q8N2C3 294 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 CHURC1Q8WUH1 139 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PIBF1Q8WXW3 757 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 COA7Q96BR5 231 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 ZNF333Q96JL9 665 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 FGD4Q96M96 766 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 LZTS2Q9BRK4 669 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 SLC26A6Q9BXS9 759 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 MOV10L1Q9BXT6 1211 aaKnown RBP8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PORCNQ9H237 461 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 HOXC10Q9NYD6 342 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 NAP1L2Q9ULW6 460 aaPredicted RBP8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PTCH2Q9Y6C5 1203 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 PARP14Q460N5 1801 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 MYH4Q9Y623 1939 aa8.37□□□□□ -1.07
TRAF3-206ENST00000558880 ASTN1O14525 1302 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 CCDC196A0A1B0GTZ2 297 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 A6NJR5 290 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 SOX1O00570 391 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-206ENST00000558880 IGHA2P01877 340 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 ICAM1P05362 532 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 SCG2P13521 617 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 RHOQP17081 205 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 GJB2P29033 226 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 SP3Q02447 781 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 EARS2Q5JPH6 523 aaKnown RBP8.36□□□□□ -1.07
TRAF3-206ENST00000558880 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 CCDC174Q6PII3 467 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 HOMER1Q86YM7 354 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 GLMNQ92990 594 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 TNFRSF25Q93038 417 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 UCN2Q96RP3 112 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 COL25A1Q9BXS0 654 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-206ENST00000558880 BARHL2Q9NY43 387 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 COL20A1Q9P218 1284 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
TRAF3-206ENST00000558880 CPA4Q9UI42 421 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 ZDHHC9Q9Y397 364 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
TRAF3-206ENST00000558880 A0A0C4DFX4 3053 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 KIF28PB7ZC32 967 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 NFIBO00712 420 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 MEIS2O14770 477 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 DEXIO95424 95 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 IL2RAP01589 272 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 STAT3P40763 770 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 OAZ1P54368 228 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 ERVK-24P63145 666 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 IRX3P78415 501 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-206ENST00000558880 CLN3Q13286 438 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
TRAF3-206ENST00000558880 FAM110CQ1W6H9 321 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 RIOX2Q8IUF8 465 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 HSCBQ8IWL3 235 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 ANKRD13CQ8N6S4 541 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 SH3TC2Q8TF17 1288 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 PARK7Q99497 189 aaKnown RBP8.35□□□□□ -1.07
TRAF3-206ENST00000558880 PHF20Q9BVI0 1012 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 SPATC1LQ9H0A9 340 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 VPS54Q9P1Q0 977 aa8.35□□□□□ -1.07
TRAF3-206ENST00000558880 BAZ2BQ9UIF8 2168 aaKnown RBP8.35□□□□□ -1.07
TRAF3-206ENST00000558880 DNAJC25-GNG10A0A024R161 153 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 GNRH1P01148 92 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 ERCC3P19447 782 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 SSRP1Q08945 709 aaKnown RBP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 PABPC4Q13310 644 aaKnown RBP eCLIP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 NCOA4Q13772 614 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 SNRNP48Q6IEG0 339 aaKnown RBP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 MB21D1Q8N884 522 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 FBXO18Q8NFZ0 1043 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 CRYGNQ8WXF5 182 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 USP6NLQ92738 828 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 RRP36Q96EU6 259 aaKnown RBP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 TEX13BQ9BXU2 312 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 ARHGAP39Q9C0H5 1083 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 ZMYND12Q9H0C1 365 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 KCNJ14Q9UNX9 436 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 MTMR6Q9Y217 621 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
TRAF3-206ENST00000558880 SMCHD1A6NHR9 2005 aa8.34□□□□□ -1.07
TRAF3-206ENST00000558880 ESYT2A0FGR8 921 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 H3BM21 787 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 CPLX1O14810 134 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 DHX16O60231 1041 aaKnown RBP8.33□□□□□ -1.08
TRAF3-206ENST00000558880 COBLO75128 1261 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 ZBED4O75132 1171 aa8.33□□□□□ -1.08
TRAF3-206ENST00000558880 SYT1P21579 422 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms